| 1. |
- Belkin, Igor, et al.
(author)
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On the discovery of ferromanganese nodules in the world ocean
- 2021
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In: Deep Sea Research Part I. - : Elsevier. - 0967-0637 .- 1879-0119. ; 175
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Journal article (peer-reviewed)abstract
- For a century, the discovery of ferromanganese (Fe–Mn) nodules in the World Ocean was universally and indisputably credited to the Challenger circum-global oceanographic expedition of 1872–1876, during which the first manganese nodules and crusts were dredged up from the sea floor in February–March 1873. A century later, a counterclaim appeared in the literature, crediting Nordenskiöld’s expedition on Sofia in 1868, five years before the Challenger findings, for the discovery of Fe–Mn nodules in the ocean. This counterclaim, widely accepted without scrutiny, was based on the Gustaf Lindström (1884) chemical analysis of a single bottom sediment sample among 14 samples from two Arctic expeditions led by Nordenskiöld:Sofia 1868 and Vega 1878–1880. The Lindström (1884) report published as an eight-page brochure in Swedish remained almost unknown to the research community until now. A close examination of this report and other historical evidence revealed that the counterclaim of discovery by the Sofia 1868 expedition to the Kara Sea is invalid based on three notable facts: (1) Sofia never sailed in the Kara Sea; (2) the single bottom sediment sample with an extremely high content of Mn (24%), was collected in the Kara Sea during the Vega Expedition across the Northeast Passage; (3) the Vega sampling was in 1878, not in 1868. Meanwhile, five and a half years prior to the Vega sampling, the first Fe–Mn nodules and crusts were dredged up from the sea floor on 18 February and March 7, 1873 during the Challenger expedition. These findings have been promptly reported and published in May 1873. Thus, the credit for the discovery of ferromanganese nodules in the World Ocean firmly belongs to the Challenger expedition.
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| 2. |
- Cranston, Alex, et al.
(author)
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A population specific mitochondrial intron from the sponge Phakellia robusta in the North-East Atlantic
- 2021
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In: Deep Sea Research Part I. - : Elsevier. - 0967-0637 .- 1879-0119. ; 172
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Journal article (peer-reviewed)abstract
- Self-splicing mitochondrial introns are a rarely reported phenomenon in animals, with a sparse and uneven distribution confined to some species of sponges, corals, placozoans, and a single species of annelid. Here, we describe a mitochondrial intron present only in some populations of Phakellia robusta, a sponge distributed across the North-east Atlantic deep-sea. The mitochondrial intron of P. robusta was detected in the position 387 of the COI gene and classified as a Group I intron of class IB. Interestingly, this intron was only detected in the shallower populations of P. robusta from Ireland to Norway, spanning 1000 km and was absent in deeper samples of the species. Such deeper populations have recently been proposed to be the result of hybridization between P. robusta and its congeneric Phakellia hirondellei. We propose that this past hybridization might be behind the absence of the intron in the specimens of P. robusta occurring at deep waters. Our analyses indicate that the intron detected in P. robusta might have a double origin (most likely fungi and other organism), as it has previously suggested for the sponge Stupenda singularis. BLAST searches produced matches with the homing endonuclease gene (HEG) nested within the S. singularis intron and this HEG belongs to the family of LAGLIDADG homing endonucleases (LHEs). The evolutionary relevance of the presence/absence of this intron for this species needs to be determined and potential adaptive advantages should not be ruled out.
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| 3. |
- Eerkes-Medrano, Dafne, et al.
(author)
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A community assessment of the demersal fish and benthic invertebrates of the Rosemary Bank Seamount marine protected area (NE Atlantic)
- 2020
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In: Deep Sea Research Part I. - : PERGAMON-ELSEVIER SCIENCE LTD. - 0967-0637 .- 1879-0119. ; 156
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Journal article (peer-reviewed)abstract
- The Rosemary Bank Seamount in the NE Atlantic was designated a Marine Protected Area in 2014 by the Scottish Government. Visual and trawl surveys of the seamount have been undertaken since 2007. Here these data are compiled and analysed to provide an assessment of the communities of demersal fish and benthic invertebrates found there. The fish and benthic invertebrate communities changed markedly with depth. Cluster analysis revealed at least four distinct communities of fish: those on the summit, the mid slope, the lower slope and the deep moat at the base of the seamount. The invertebrate community changed at a depth of 1100 m, where mixed-species sponge aggregations dominated to depths of 1500 m. The seamount is an important site for vulnerable marine ecosystems, most notably the extensive and unusually diverse deep-sea sponge grounds on the lower slope. Other prioritised conservation species and habitats recorded included cold water corals, orange roughy, blue ling, leafscale gulper shark and the Portuguese dogfish. Due to sampling constraints some areas of the seamount still remain unknown. A precautionary approach to protecting the entire seamount would achieve multiple conservation objectives. The data presented here serve as a base-line to assess the impact of management intervention in the future.
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| 4. |
- Lin, Yi-Tao, et al.
(author)
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Phylogenetic placement, morphology and gill-associated bacteria of a new genus and species of deep-sea mussel (Mytilidae: Bathymodiolinae) from the South China Sea
- 2022
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In: Deep Sea Research Part I. - Amsterdam : Elsevier. - 0967-0637 .- 1879-0119. ; 190, s. 103894-103894
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Journal article (peer-reviewed)abstract
- Mussels in the subfamily Bathymodiolinae are common inhabitants of deep-sea chemosynthetic habitats, but in many places their diversity remains unknown. Here we describe Nypamodiolus samadiae n. gen. et n. sp. (Mytilidae: Bathymodiolinae) based on samples collected from the Haima cold seep in the South China Sea. Phylogenetic analyses based on fragments of three mitochondrial (cox1, 16S rRNA and nad4) and three nuclear (18S rRNA, 28S rRNA and histone H3) genes show that this new species belongs to a new genus, Nypamodiolus, which includes three named species (Myrina longissima Thiele and Jaeckel, 1931, Myrina simpsoni Marshall, 1900, Idasola japonica Habe, 1976) and a few undescribed species. Nypamodiolus n. gen. is characterized by small-sized, modioliform to fan-shaped shells with the umbones in a non-terminal position, and by robust anterior and posterior byssal retractor muscles arranged in roughly one plane. Most closely related to Nypamodiolus samadiae n. sp. is an undescribed species from the northern Papua New Guinea, to which it has a Kimura-2-parameter genetic distance of 11.8% for cox1. Sequencing the V3–V4 region of the microbial 16S rRNA gene reveals two dominant gill-associated bacteria in the new species, including one sulfur-oxidizing Gammaproteobacteria (relative abundance: 43.8–58.8%) and one unclassified Spirochaetes (relative abundance: 23.9–28.1%). Morphologically, N. samadiae n. sp. is similar to N. simpsoni, while can be distinguished by a larger maximum shell size (45.0 mm vs. 40.0 mm), larger length/height ratio (2.6–2.9 vs. 2.1–2.4), broader posterior end, slightly curved dorsal margin, and more anterior umbones.
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| 5. |
- Taboada, Sergi, et al.
(author)
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Genetic diversity, gene flow and hybridization in fan-shaped sponges (Phakellia spp.) in the North-East Atlantic deep sea
- 2022
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In: Deep Sea Research Part I. - : Elsevier. - 0967-0637 .- 1879-0119. ; 181
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Journal article (peer-reviewed)abstract
- Deep-sea North Atlantic sponge grounds are crucial components of the marine fauna providing a key role in ecosystem functioning. To properly develop effective conservation and management plans, it is crucial to understand the genetic diversity, molecular connectivity patterns and turnover at the population level of the species involved. Here we present the study of two congeneric sponges, Phakellia robusta and Phakellia hirondellei, using multiple sources of evidence. Our phylogenetic study using a fragment of COI placed these two species as sister. Haplotype network analysis using COI revealed no genetic structure for P. hirondellei in samples from the Cantabrian Sea (<100 km). Contrastingly, P. robusta showed a clear genetic structure separating deep-water samples from the Cantabrian Sea and the Hatton-Rockall Basin, from samples from shallower waters from Kerry Head Reefs, NW of Orkney, and Norway. ddRADseq-derived SNPs for P. robusta also segregated samples by bathymetry rather than by geographical distances, and detected a predominant northwards migration for shallow-water specimens connecting sites separated ca. 2,000 km, probably thanks to prevalent oceanographic currents. Importantly, our analysis using SNPs combining the datasets of the two species revealed the presence of potential hybrids, which was corroborated by morphological (spicule) and microbial (16S amplicon sequencing) analyses. Our data suggest that hybridization between these two species occurred at least two times in the past. We discuss the importance of using next-generation techniques to unveil hybridization and the implications of our results for conservation.
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| 6. |
- Taboada, Sergi, et al.
(author)
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Insights into the symbiotic relationship between scale worms and carnivorous sponges (Cladorhizidae, Chondrocladia)
- 2020
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In: Deep Sea Research Part I. - : PERGAMON-ELSEVIER SCIENCE LTD. - 0967-0637 .- 1879-0119. ; 156
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Journal article (peer-reviewed)abstract
- Symbiotic associations between polynoid scale worms and other marine invertebrates are common, but sometimes poorly understood. Compounding this problem is the fact that polynoid systematics is largely unresolved. Here, we transfer the species originally described as Nemidia antillicola chondrocladiae Fauvel (1943), and currently synonymized with Neopolynoe acanellae (Verrill, 1881), to the species Neopolynoe chondrocladiae n. comb. This species is characterized by living in association with the carnivorous sponges Chondrocladia robertballnrdi Cristobo, Rios, Pomponi & Xavier, 2015 and Chondrocladia virgata Thompson, 1873. The existence of specialized chaetae in N. chondrocladiae n. comb. and the occurrence of open galleries in the sponge, derived from a gradual overgrowth of the sponge to accommodate the worm, suggest an obligate symbiotic relationship between worm and sponge. The presence of a gravid female with relatively small oocytes (maximum diameter 56.94 +/- 14.89 mu m) suggests that N. chondrocladiae n. comb. is a gonochoristic broadcaster with a planktotrophic larva, a means of reproduction that would maximize the chances of this species finding new suitable hosts to colonize. We also provide a phylogenetic placement, using four genetic markers (18S, 28S, 16S and COI), for N. chondrocladiae n. comb. and N. acanellae, which confirms they are two different species. In addition, we also report here the occurrence of another deep-water polynoid species in association with the carnivorous sponge Chondrocladia vertical= Topsent, 1920, from the Gulf of Mexico, and place it in a phylogeny.
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