| 1. |
- Sodergren, Erica, et al.
(författare)
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The genome of the sea urchin Strongylocentrotus purpuratus.
- 2006
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Ingår i: Science. - : American Association for the Advancement of Science (AAAS). - 1095-9203 .- 0036-8075. ; 314:5801, s. 941-52
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Tidskriftsartikel (refereegranskat)abstract
- We report the sequence and analysis of the 814-megabase genome of the sea urchin Strongylocentrotus purpuratus, a model for developmental and systems biology. The sequencing strategy combined whole-genome shotgun and bacterial artificial chromosome (BAC) sequences. This use of BAC clones, aided by a pooling strategy, overcame difficulties associated with high heterozygosity of the genome. The genome encodes about 23,300 genes, including many previously thought to be vertebrate innovations or known only outside the deuterostomes. This echinoderm genome provides an evolutionary outgroup for the chordates and yields insights into the evolution of deuterostomes.
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| 2. |
- Hoffman, Eric A., et al.
(författare)
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Genetic structure in the coral-reef-associated Banggai cardinalfish, Pterapogon kauderni
- 2005
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Ingår i: Molecular Ecology. - 0962-1083 .- 1365-294X. ; 14:5, s. 1367-1375
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Tidskriftsartikel (refereegranskat)abstract
- In this study, we used 11 polymorphic microsatellite loci to show that oceanic distances as small as 2–5 km are sufficient to produce high levels of population genetic structure (multilocus FST as high as 0.22) in the Banggai cardinalfish(Pterapogon kauderni), a heavily exploited reef fish lacking a pelagic larval dispersal phase. Global FST among all populations, separated by a maximum distance of 203 km, was 0.18 (RST = 0.35). Moreover, two lines of evidence suggest that estimates of FST may actually underestimate the true level of genetic structure. First, within-locus FST values were consistently close to the theoretical maximum set by the average within-population heterozygosity. Second, the allele size permutation test showed that RST values were significantly larger than FST values, indicating that populations have been isolated long enough for mutation to have played a role in generating allelic variation among populations. The high level of microspatial structure observed in this marine fish indicates that life history traits such as lack of pelagic larval phase and a good homing ability do indeed play a role in shaping population genetic structure in the marine realm.
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| 3. |
- Kolm, Niclas, et al.
(författare)
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Group stability and homing behavior but no kin group sturcture in a coral reef fish
- 2005
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Ingår i: Behavioral Ecology. - : Oxford University Press (OUP). - 1045-2249 .- 1465-7279. ; 16:3, s. 521-527
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Tidskriftsartikel (refereegranskat)abstract
- Understanding the reasons behind stable group formations has received considerable theoretical and empirical attention. Stable groups displaying homing behavior have been suggested to form as a result of, for instance, benefits from knowledge of the social or physical environment or through kin selection and the forming of kin groups. However, no one has disentangled preference for grouping in a familiar location from preference for grouping with familiar or related individuals. To investigate this, we conducted a series of field experiments and a group genetic analysis on the group-living Banggai cardinalfish (Pterapogon kauderni). We found homing behavior but no evidence for recognition of familiar group members. Instead, homing was based on the original location of their group rather than the individuals in that group. Moreover, we found no evidence for kin structures within these groups. We suggest that benefits from living in a known social environment drive homing behavior in this species and that homing behavior is not enough for the formation of kin group structures. Instead, our results suggest that kin recognition may be a prerequisite for the forming of kin groups.
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| 4. |
- LeBlanc, Erin S, et al.
(författare)
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The effects of serum testosterone, estradiol, and sex hormone binding globulin levels on fracture risk in older men.
- 2009
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Ingår i: The Journal of clinical endocrinology and metabolism. - : The Endocrine Society. - 1945-7197 .- 0021-972X. ; 94:9, s. 3337-46
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Tidskriftsartikel (refereegranskat)abstract
- CONTEXT: The relationship between sex steroids and fracture is poorly understood. OBJECTIVE: The objective of the study was to examine associations between nonvertebral fracture risk and bioavailable estradiol (bioE2), bioavailable testosterone (bioT), and SHBG. DESIGN: This was a case-cohort study. SETTING: The Osteoporotic Fractures in Men Study (MrOS) was conducted in a prospective U.S. cohort in 5995 community-dwelling men 65 yr old or older. PARTICIPANTS: Participants included a subcohort of 1436 randomly chosen white men plus all 446 minorities and all those with incident hip and other nonvertebral fractures. MAIN OUTCOME MEASURES: Baseline testosterone and estradiol were measured by mass spectrometry (MS) and SHBG by RIA. RESULTS: Men with the lowest bioE2 (<11.4 pg/ml) or highest SHBG (>59.1 nm) had greater risk of all nonvertebral fractures [adjusted hazard ratio (HR) [95% confidence interval]: 1.5 (1.2-1.9) and 1.4 (1.1-21.8), respectively]. Men with the lowest bioT (<163.5 ng/dl) had no increased fracture risk after adjustment for bioE2 [adjusted HR 1.16 (0.90-1.49)]. A significant interaction between SHBG and bioT (P = 0.03) resulted in men with low bioT and high SHBG having higher fracture risk [HR 2.1 (1.4-3.2)]. Men with low bioE2, low bioT, and high SHBG were at highest risk [HR 3.4 (2.2-5.3)]. CONCLUSIONS: Older men with low bioE2 or high SHBG levels are at increased risk of nonvertebral fracture. When SHBG levels are high, men with low bioT levels have higher risk. The strongest association occurred when all measures were considered in combination.
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