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A guide to avian museomics : Insights gained from resequencing hundreds of avian study skins

Irestedt, Martin (author)
Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Department of Bioinformatics and Genetics Swedish Museum of Natural History Stockholm Sweden
Thörn, Filip (author)
Naturhistoriska riksmuseet,Stockholms universitet,Zoologiska institutionen,Department of Bioinformatics and Genetics Swedish Museum of Natural History Stockholm Sweden;Department of Zoology Stockholm University Stockholm Sweden,Enheten för bioinformatik och genetik
Müller, Ingo A. (author)
Naturhistoriska riksmuseet,Stockholms universitet,Zoologiska institutionen,Department of Bioinformatics and Genetics Swedish Museum of Natural History Stockholm Sweden;Department of Zoology Stockholm University Stockholm Sweden,Enheten för bioinformatik och genetik
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Jønsson, Knud A. (author)
Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
Ericson, Per G. P. (author)
Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Department of Bioinformatics and Genetics Swedish Museum of Natural History Stockholm Sweden
Blom, Mozes P. K. (author)
Museum für Naturkunde Leibniz Institut für Evolutions‐ und Biodiversitätsforschung Berlin Germany
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 (creator_code:org_t)
2022-06-23
2022
English.
In: Molecular Ecology Resources. - : Wiley. - 1755-098X .- 1755-0998. ; 22:7, s. 2672-2684
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • Biological specimens in natural history collections constitute a massive repository of genetic information. Many specimens have been collected in areas in which they no longer exist or in areas where present-day collecting is not possible. There are also specimens in collections representing populations or species that have gone extinct. Furthermore, species or populations may have been sampled throughout an extensive time period, which is particularly valuable for studies of genetic change through time. With the advent of high-throughput sequencing, natural history museum resources have become accessible for genomic research. Consequently, these unique resources are increasingly being used across many fields of natural history. In this paper, we summarize our experiences of resequencing hundreds of genomes from historical avian museum specimens. We publish the protocols we have used and discuss the entire workflow from sampling and laboratory procedures, to the bioinformatic processing of historical specimen data.

Subject headings

NATURVETENSKAP  -- Biologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences (hsv//eng)

Keyword

birds
genomic libraries
museomics
natural history collections
Ecosystems and species history

Publication and Content Type

ref (subject category)
art (subject category)

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