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Divergent clonal differentiation trajectories establish CD8(+) memory T cell heterogeneity during acute viral infections in humans

Mold, Jeff E. (author)
Karolinska Institutet
Modolo, Laurent (author)
Univ Lyon 1, LBBE, UMR CNRS 5558, Villeurbanne, France.;ENS Lyon, LBMC UMR 5239 CNRS, Lyon, France.
Hard, Joanna (author)
Karolinska Inst, Dept Cell & Mol Biol, S-17177 Stockholm, Sweden.
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Zamboni, Margherita (author)
Karolinska Institutet
Larsson, Anton J. M. (author)
Karolinska Institutet
Stenudd, Moa (author)
Karolinska Inst, Dept Cell & Mol Biol, S-17177 Stockholm, Sweden.
Eriksson, Carl-Johan (author)
Karolinska Institutet
Durif, Ghislain (author)
Univ Lyon 1, LBBE, UMR CNRS 5558, Villeurbanne, France.;ENS Lyon, LBMC UMR 5239 CNRS, Lyon, France.
Ståhl, Patrik (author)
KTH,Genteknologi,Science for Life Laboratory, SciLifeLab,Karolinska Inst, Dept Cell & Mol Biol, S-17177 Stockholm, Sweden
Borgström, Erik (author)
KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
Picelli, Simone (author)
Karolinska Inst, Dept Cell & Mol Biol, S-17177 Stockholm, Sweden.
Reinius, Björn (author)
Karolinska Institutet
Sandberg, Rickard (author)
Karolinska Institutet
Reu, Pedro (author)
Karolinska Inst, Dept Cell & Mol Biol, S-17177 Stockholm, Sweden.
Talavera-Lopez, Carlos (author)
Karolinska Inst, Dept Cell & Mol Biol, S-17177 Stockholm, Sweden.
Andersson, Björn (author)
Karolinska Institutet
Blom, Kim (author)
Karolinska Institutet
Sandberg, Johan K. (author)
Karolinska Institutet
Picard, Franck (author)
Univ Lyon 1, LBBE, UMR CNRS 5558, Villeurbanne, France.;ENS Lyon, LBMC UMR 5239 CNRS, Lyon, France.
Michaelsson, Jakob (author)
Karolinska Univ Hosp Huddinge, Ctr Infect Med, Karolinska Inst, Dept Med, S-14186 Stockholm, Sweden.
Frisen, Jonas (author)
Karolinska Institutet
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Karolinska Institutet Univ Lyon 1, LBBE, UMR CNRS 5558, Villeurbanne, France;ENS Lyon, LBMC UMR 5239 CNRS, Lyon, France. (creator_code:org_t)
Elsevier BV, 2021
2021
English.
In: Cell Reports. - : Elsevier BV. - 2211-1247. ; 35:8
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • The CD8(+) T cell response to an antigen is composed of many T cell clones with unique T cell receptors, together forming a heterogeneous repertoire of effector and memory cells. How individual T cell clones contribute to this heterogeneity throughout immune responses remains largely unknown. In this study, we longitudinally track human CD8(+) T cell clones expanding in response to yellow fever virus (YFV) vaccination at the single-cell level. We observed a drop in clonal diversity in blood from the acute to memory phase, suggesting that clonal selection shapes the circulating memory repertoire. Clones in the memory phase display biased differentiation trajectories along a gradient from stem cell to terminally differentiated effector memory fates. In secondary responses, YFV- and influenza-specific CD8(+) T cell clones are poised to recapitulate skewed differentiation trajectories. Collectively, we show that the sum of distinct clonal phenotypes results in the multifaceted human T cell response to acute viral infections.

Subject headings

MEDICIN OCH HÄLSOVETENSKAP  -- Medicinska och farmaceutiska grundvetenskaper -- Immunologi inom det medicinska området (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Basic Medicine -- Immunology in the medical area (hsv//eng)

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