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COordination of Sta...
COordination of Standards in MetabOlomicS (COSMOS) : facilitating integrated metabolomics data access
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- Salek, Reza M (författare)
- European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus Hinxton, Cambridge, United Kingdom; Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom
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- Neumann, Steffen (författare)
- Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany
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- Schober, Daniel (författare)
- Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany
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- Hummel, Jan (författare)
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
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- Billiau, Kenny (författare)
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
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- Kopka, Joachim (författare)
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
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- Correa, Elon (författare)
- School of Chemistry & Manchester Institute of Biotechnology, University of Manchester, Manchester, United Kingdom
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- Reijmers, Theo (författare)
- Division of Analytical Biosciences, Leiden Academic Center for Drug Research, Leiden University, Leiden, Netherlands
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- Rosato, Antonio (författare)
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino FI, Italy
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- Tenori, Leonardo (författare)
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino FI, Italy; FiorGen Foundation, Sesto Fiorentin FI, Italy
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- Turano, Paola (författare)
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino FI, Italy
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- Marin, Silvia (författare)
- Department of Biochemistry and Molecular Biology, IBUB, Universitat de Barcelona, Barcelona, Spain
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- Deborde, Catherine (författare)
- INRA, Univ. Bordeaux, UMR1332 Fruit Biology and Pathology, Metabolome Facility of Bordeaux (MetaboHUB), Functional Genomics Center, IBVM, Centre INRA Bordeaux, Villenave d’Ornon, France
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- Jacob, Daniel (författare)
- INRA, Univ. Bordeaux, UMR1332 Fruit Biology and Pathology, Metabolome Facility of Bordeaux (MetaboHUB), Functional Genomics Center, IBVM, Centre INRA Bordeaux, Villenave d’Ornon, France
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- Rolin, Dominique (författare)
- INRA, Univ. Bordeaux, UMR1332 Fruit Biology and Pathology, Metabolome Facility of Bordeaux (MetaboHUB), Functional Genomics Center, IBVM, Centre INRA Bordeaux, Villenave d’Ornon, France
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- Dartigues, Benjamin (författare)
- Centre of bioinformatics of Bordeaux (CBiB), University of Bordeaux, Bordeaux, France
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- Conesa, Pablo (författare)
- European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus Hinxton, Cambridge, United Kingdom
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- Haug, Kenneth (författare)
- European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus Hinxton, Cambridge, United Kingdom
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- Rocca-Serra, Philippe (författare)
- University of Oxford e-Research Centre, Oxford, United Kingdom
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- O'Hagan, Steve (författare)
- School of Chemistry & Manchester Institute of Biotechnology, University of Manchester, Manchester, United Kingdom
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- Hao, Jie (författare)
- Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London, London, United Kingdom
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- van Vliet, Michael (författare)
- Division of Analytical Biosciences, Leiden Academic Center for Drug Research, Leiden University, Leiden, Netherlands
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- Sysi-Aho, Marko (författare)
- Zora Biosciences OY, Espoo, Finland
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- Ludwig, Christian (författare)
- School of Cancer Sciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom
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- Bouwman, Jildau (författare)
- Microbiology & Systems Biology TNO, Zeist, Netherlands
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- Cascante, Marta (författare)
- Department of Biochemistry and Molecular Biology, IBUB, Universitat de Barcelona, Barcelona, Spain
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- Ebbels, Timothy (författare)
- Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London, London, United Kingdom
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- Griffin, Julian L (författare)
- Medical Research Council Human Nutrition Research, Cambridge, United Kingdom; Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom
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- Moing, Annick (författare)
- INRA, UMR1332 Fruit Biology and Pathology, Metabolome Facility of Bordeaux (MetaboHUB), Functional Genomics Center (IBVM), Centre INRA Bordeaux Villenave d’Ornon, Univ. Bordeaux, Bordeaux, France
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- Nikolski, Macha (författare)
- University of Bordeaux CBiB/LaBRI, Bordeaux, France
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- Oresic, Matej, 1967- (författare)
- Örebro universitet,Institutionen för medicinska vetenskaper,Zora Biosciences OY, Espoo, Finland
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- Sansone, Susanna-Assunta (författare)
- University of Oxford e-Research Centre, Oxford, United Kingdom
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- Viant, Mark R. (författare)
- School of Biosciences, University of Birmingham Edgbaston, Birmingham, United Kingdom
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- Goodacre, Royston (författare)
- School of Chemistry & Manchester Institute of Biotechnology, University of Manchester, Manchester, United Kingdom
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- Günther, Ulrich L (författare)
- School of Cancer Sciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom
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- Hankemeier, Thomas (författare)
- Division of Analytical Biosciences, Leiden Academic Center for Drug Research, Leiden University, Leiden, Netherlands
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- Luchinat, Claudio (författare)
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino FI, Italy
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- Walther, Dirk (författare)
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
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- Steinbeck, Christoph (författare)
- European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus Hinxton, Cambridge, United Kingdom
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(creator_code:org_t)
- 2015-05-26
- 2015
- Engelska.
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Ingår i: Metabolomics. - : Springer-Verlag New York. - 1573-3882 .- 1573-3890. ; 11:6, s. 1587-1597
- Relaterad länk:
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https://doi.org/10.1...
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https://link.springe...
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https://urn.kb.se/re...
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https://doi.org/10.1...
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Abstract
Ämnesord
Stäng
- Metabolomics has become a crucial phenotyping technique in a range of research fields including medicine, the life sciences, biotechnology and the environmental sciences. This necessitates the transfer of experimental information between research groups, as well as potentially to publishers and funders. After the initial efforts of the metabolomics standards initiative, minimum reporting standards were proposed which included the concepts for metabolomics databases. Built by the community, standards and infrastructure for metabolomics are still needed to allow storage, exchange, comparison and re-utilization of metabolomics data. The Framework Programme 7 EU Initiative 'coordination of standards in metabolomics' (COSMOS) is developing a robust data infrastructure and exchange standards for metabolomics data and metadata. This is to support workflows for a broad range of metabolomics applications within the European metabolomics community and the wider metabolomics and biomedical communities' participation. Here we announce our concepts and efforts asking for re-engagement of the metabolomics community, academics and industry, journal publishers, software and hardware vendors, as well as those interested in standardisation worldwide (addressing missing metabolomics ontologies, complex-metadata capturing and XML based open source data exchange format), to join and work towards updating and implementing metabolomics standards.
Ämnesord
- NATURVETENSKAP -- Data- och informationsvetenskap -- Bioinformatik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Bioinformatics (hsv//eng)
- MEDICIN OCH HÄLSOVETENSKAP -- Medicinsk bioteknologi -- Biomedicinsk laboratorievetenskap/teknologi (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Medical Biotechnology -- Biomedical Laboratory Science/Technology (hsv//eng)
Nyckelord
- Coordination and data sharing community
- Data exchange
- Data standards
- Metabolomics
- Metabonomics
- e-Infrastructure
Publikations- och innehållstyp
- ref (ämneskategori)
- art (ämneskategori)
Hitta via bibliotek
Till lärosätets databas
- Av författaren/redakt...
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Salek, Reza M
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Neumann, Steffen
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Schober, Daniel
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Hummel, Jan
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Billiau, Kenny
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Kopka, Joachim
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visa fler...
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Correa, Elon
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Reijmers, Theo
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Rosato, Antonio
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Tenori, Leonardo
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Turano, Paola
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Marin, Silvia
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Deborde, Catheri ...
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Jacob, Daniel
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Rolin, Dominique
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Dartigues, Benja ...
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Conesa, Pablo
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Haug, Kenneth
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Rocca-Serra, Phi ...
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O'Hagan, Steve
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Hao, Jie
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van Vliet, Micha ...
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Sysi-Aho, Marko
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Ludwig, Christia ...
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Bouwman, Jildau
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Cascante, Marta
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Ebbels, Timothy
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Griffin, Julian ...
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Moing, Annick
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Nikolski, Macha
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Oresic, Matej, 1 ...
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Sansone, Susanna ...
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Viant, Mark R.
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Goodacre, Roysto ...
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Günther, Ulrich ...
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Hankemeier, Thom ...
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Luchinat, Claudi ...
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Walther, Dirk
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Steinbeck, Chris ...
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- Om ämnet
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- NATURVETENSKAP
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NATURVETENSKAP
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och Data och informa ...
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och Bioinformatik
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- MEDICIN OCH HÄLSOVETENSKAP
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MEDICIN OCH HÄLS ...
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och Medicinsk biotek ...
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och Biomedicinsk lab ...
- Artiklar i publikationen
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Metabolomics
- Av lärosätet
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Örebro universitet