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Predicting Aromatic Amine Mutagenicity With Confidence : A Case Study Using Conformal Prediction

Norinder, Ulf, 1956- (author)
Stockholms universitet,Institutionen för data- och systemvetenskap,Swetox, Karolinska Institutet, Sweden
Myatt, Glenn (author)
Leadscope, Columbus, USA
Ahlberg, Ernst (author)
AstraZeneca R&D Gothenburg, Mölndal, Sweden
 (creator_code:org_t)
2018-08-29
2018
English.
In: Biomolecules. - : MDPI. - 2218-273X. ; 8:3
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • The occurrence of mutagenicity in primary aromatic amines has been investigated using conformal prediction. The results of the investigation show that it is possible to develop mathematically proven valid models using conformal prediction and that the existence of uncertain classes of prediction, such as both (both classes assigned to a compound) and empty (no class assigned to a compound), provides the user with additional information on how to use, further develop, and possibly improve future models. The study also indicates that the use of different sets of fingerprints results in models, for which the ability to discriminate varies with respect to the set level of acceptable errors.

Subject headings

NATURVETENSKAP  -- Data- och informationsvetenskap (hsv//swe)
NATURAL SCIENCES  -- Computer and Information Sciences (hsv//eng)
NATURVETENSKAP  -- Biologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences (hsv//eng)

Keyword

aromatic amines
confidence
conformal prediction
mutagenicity
random forest

Publication and Content Type

ref (subject category)
art (subject category)

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Norinder, Ulf, 1 ...
Myatt, Glenn
Ahlberg, Ernst
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NATURAL SCIENCES
NATURAL SCIENCES
and Computer and Inf ...
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
Articles in the publication
Biomolecules
By the university
Örebro University
Stockholm University
Karolinska Institutet

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