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Towards integration of population and comparative genomics in forest trees
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- Ingvarsson, Pär K. (author)
- Umeå universitet,Institutionen för ekologi, miljö och geovetenskap,Umeå Plant Science Centre (UPSC)
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- Hvidsten, Torgeir R. (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC),Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432,As, Norway
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- Street, Nathaniel R. (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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(creator_code:org_t)
- 2016-08-30
- 2016
- English.
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In: New Phytologist. - : Wiley. - 0028-646X .- 1469-8137. ; 212:2, s. 338-344
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https://urn.kb.se/re...
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Abstract
Subject headings
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- The past decade saw the initiation of an ongoing revolution in sequencing technologies that is transforming all fields of biology. This has been driven by the advent and widespread availability of high-throughput, massively parallel short-read sequencing (MPS) platforms. These technologies have enabled previously unimaginable studies, including draft assemblies of the massive genomes of coniferous species and population-scale resequencing. Transcriptomics studies have likewise been transformed, with RNA-sequencing enabling studies in nonmodel organisms, the discovery of previously unannotated genes (novel transcripts), entirely new classes of RNAs and previously unknown regulatory mechanisms. Here we touch upon current developments in the areas of genome assembly, comparative regulomics and population genetics as they relate to studies of forest tree species.
Subject headings
- NATURVETENSKAP -- Biologi -- Botanik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Botany (hsv//eng)
- NATURVETENSKAP -- Biologi -- Genetik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Genetics (hsv//eng)
Keyword
- comparative genomics
- comparative regulomics
- expression network
- expressolog
- genome assembly
- population genetics
Publication and Content Type
- ref (subject category)
- for (subject category)
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