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Generation of a mutator parasite to drive resistome discovery in Plasmodium falciparum

Kümpornsin, Krittikorn (författare)
Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom; Calibr, Division of the Scripps Research Institute, CA, La Jolla, United States
Kochakarn, Theerarat (författare)
Umeå universitet,Molekylär Infektionsmedicin, Sverige (MIMS),Institutionen för molekylärbiologi (Teknisk-naturvetenskaplig fakultet)
Yeo, Tomas (författare)
Department of Microbiology and Immunology, Columbia University Irving Medical Center, NY, New York, United States
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Okombo, John (författare)
Department of Microbiology and Immunology, Columbia University Irving Medical Center, NY, New York, United States
Luth, Madeline R. (författare)
Department of Pediatrics, School of Medicine, University of California, San Diego, CA, La Jolla, United States
Hoshizaki, Johanna (författare)
Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom
Rawat, Mukul (författare)
Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom
Pearson, Richard D. (författare)
Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom
Schindler, Kyra A. (författare)
Department of Microbiology and Immunology, Columbia University Irving Medical Center, NY, New York, United States
Mok, Sachel (författare)
Department of Microbiology and Immunology, Columbia University Irving Medical Center, NY, New York, United States; Center for Malaria Therapeutics and Antimicrobial Resistance, Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, NY, New York, United States
Park, Heekuk (författare)
Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, NY, New York, United States
Uhlemann, Anne-Catrin (författare)
Center for Malaria Therapeutics and Antimicrobial Resistance, Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, NY, New York, United States; Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, NY, New York, United States
Jana, Gouranga P. (författare)
TCG Lifesciences Private Limited, Salt-lake Electronics Complex, Kolkata, India
Maity, Bikash C. (författare)
TCG Lifesciences Private Limited, Salt-lake Electronics Complex, Kolkata, India
Laleu, Benoît (författare)
Medicines for Malaria Venture, International Centre Cointrin, Geneva, Switzerland
Chenu, Elodie (författare)
Medicines for Malaria Venture, International Centre Cointrin, Geneva, Switzerland
Duffy, James (författare)
Medicines for Malaria Venture, International Centre Cointrin, Geneva, Switzerland
Moliner Cubel, Sonia (författare)
Global Health Medicines R&D, GlaxoSmithKline, Tres Cantos, Madrid, Spain
Franco, Virginia (författare)
Global Health Medicines R&D, GlaxoSmithKline, Tres Cantos, Madrid, Spain
Gomez-Lorenzo, Maria G. (författare)
Global Health Medicines R&D, GlaxoSmithKline, Tres Cantos, Madrid, Spain
Gamo, Francisco Javier (författare)
Global Health Medicines R&D, GlaxoSmithKline, Tres Cantos, Madrid, Spain
Winzeler, Elizabeth A. (författare)
Department of Pediatrics, School of Medicine, University of California, San Diego, CA, La Jolla, United States
Fidock, David A. (författare)
Department of Microbiology and Immunology, Columbia University Irving Medical Center, NY, New York, United States; Center for Malaria Therapeutics and Antimicrobial Resistance, Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, NY, New York, United States
Chookajorn, Thanat (författare)
Umeå universitet,Molekylär Infektionsmedicin, Sverige (MIMS),Institutionen för molekylärbiologi (Teknisk-naturvetenskaplig fakultet),Genomics and Evolutionary Medicine Unit, Centre of Excellence in Malaria Research, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand
Lee, Marcus C. S. (författare)
Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom; Biological Chemistry and Drug Discovery, Wellcome Centre for Anti-Infectives Research, University of Dundee, Dundee, United Kingdom
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 (creator_code:org_t)
Springer Nature, 2023
2023
Engelska.
Ingår i: Nature Communications. - : Springer Nature. - 2041-1723. ; 14:1
  • Tidskriftsartikel (refereegranskat)
Abstract Ämnesord
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  • In vitro evolution of drug resistance is a powerful approach for identifying antimalarial targets, however, key obstacles to eliciting resistance are the parasite inoculum size and mutation rate. Here we sought to increase parasite genetic diversity to potentiate resistance selections by editing catalytic residues of Plasmodium falciparum DNA polymerase δ. Mutation accumulation assays reveal a ~5–8 fold elevation in the mutation rate, with an increase of 13–28 fold in drug-pressured lines. Upon challenge with the spiroindolone PfATP4-inhibitor KAE609, high-level resistance is obtained more rapidly and at lower inocula than wild-type parasites. Selections also yield mutants with resistance to an “irresistible” compound, MMV665794 that failed to yield resistance with other strains. We validate mutations in a previously uncharacterised gene, PF3D7_1359900, which we term quinoxaline resistance protein (QRP1), as causal for resistance to MMV665794 and a panel of quinoxaline analogues. The increased genetic repertoire available to this “mutator” parasite can be leveraged to drive P. falciparum resistome discovery.

Ämnesord

MEDICIN OCH HÄLSOVETENSKAP  -- Medicinska och farmaceutiska grundvetenskaper -- Cell- och molekylärbiologi (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Basic Medicine -- Cell and Molecular Biology (hsv//eng)
MEDICIN OCH HÄLSOVETENSKAP  -- Klinisk medicin -- Infektionsmedicin (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Clinical Medicine -- Infectious Medicine (hsv//eng)
NATURVETENSKAP  -- Biologi -- Genetik (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Genetics (hsv//eng)

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