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The Oxymonad Genome Displays Canonical Eukaryotic Complexity in the Absence of a Mitochondrion

Karnkowska, Anna (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic;Univ Warsaw, Fac Biol, Biol & Chem Res Ctr, Dept Mol Phylogenet & Evolut, Warsaw, Poland
Treitli, Sebastian C. (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic
Brzon, Ondrej (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic
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Novak, Lukas (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic
Vacek, Vojtech (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic
Soukal, Petr (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic
Barlow, Lael D. (author)
Univ Alberta, Dept Med, Div Infect Dis, Edmonton, AB, Canada
Herman, Emily K. (author)
Univ Alberta, Dept Med, Div Infect Dis, Edmonton, AB, Canada
Pipaliya, Shweta, V (author)
Univ Alberta, Dept Med, Div Infect Dis, Edmonton, AB, Canada
Panek, Tomas (author)
Univ Ostrava, Fac Sci, Dept Biol & Ecol, Ostrava, Czech Republic
Zihala, David (author)
Univ Ostrava, Fac Sci, Dept Biol & Ecol, Ostrava, Czech Republic
Petrzelkova, Romana (author)
Univ Ostrava, Fac Sci, Dept Biol & Ecol, Ostrava, Czech Republic
Butenko, Anzhelika (author)
Univ Ostrava, Fac Sci, Dept Biol & Ecol, Ostrava, Czech Republic
Eme, Laura (author)
Uppsala universitet,Institutionen för cell- och molekylärbiologi,Dalhousie Univ, Dept Biochem & Mol Biol, Halifax, NS, Canada
Stairs, Courtney W. (author)
Uppsala universitet,Institutionen för cell- och molekylärbiologi,Dalhousie Univ, Dept Biochem & Mol Biol, Halifax, NS, Canada
Roger, Andrew J. (author)
Dalhousie Univ, Dept Biochem & Mol Biol, Halifax, NS, Canada
Elias, Marek (author)
Univ Ostrava, Fac Sci, Dept Biol & Ecol, Ostrava, Czech Republic;Univ Ostrava, Fac Sci, Inst Environm Technol, Ostrava, Czech Republic
Dacks, Joel B. (author)
Univ Alberta, Dept Med, Div Infect Dis, Edmonton, AB, Canada
Hampl, Vladimir (author)
Charles Univ Prague, Fac Sci, Dept Parasitol, BIOCEV, Vestec, Czech Republic
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 (creator_code:org_t)
2019-08-06
2019
English.
In: Molecular biology and evolution. - : OXFORD UNIV PRESS. - 0737-4038 .- 1537-1719. ; 36:10, s. 2292-2312
  • Journal article (peer-reviewed)
Abstract Subject headings
Close  
  • The discovery that the protist Monocercomonoides exilis completely lacks mitochondria demonstrates that these organelles are not absolutely essential to eukaryotic cells. However, the degree to which the metabolism and cellular systems of this organism have adapted to the loss of mitochondria is unknown. Here, we report an extensive analysis of the M. exilis genome to address this question. Unexpectedly, we find that M. exilis genome structure and content is similar in complexity to other eukaryotes and less "reduced" than genomes of some other protists from the Metamonada group to which it belongs. Furthermore, the predicted cytoskeletal systems, the organization of endomembrane systems, and biosynthetic pathways also display canonical eukaryotic complexity. The only apparent preadaptation that permitted the loss of mitochondria was the acquisition of the SUF system for Fe-S cluster assembly and the loss of glycine cleavage system. Changes in other systems, including in amino acid metabolism and oxidative stress response, were coincident with the loss of mitochondria but are likely adaptations to the microaerophilic and endobiotic niche rather than the mitochondrial loss per se. Apart from the lack of mitochondria and peroxisomes, we show that M. exilis is a fully elaborated eukaryotic cell that is a promising model system in which eukaryotic cell biology can be investigated in the absence of mitochondria.

Subject headings

NATURVETENSKAP  -- Biologi -- Biokemi och molekylärbiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Biochemistry and Molecular Biology (hsv//eng)

Keyword

amitochondrial eukaryote
cell biology
Monocercomonoides
oxymonads
protist genomics

Publication and Content Type

ref (subject category)
art (subject category)

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