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Transient colonizing microbes promote gut dysbiosis and functional impairment

Lee, Sunjae (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK; School of Life Sciences, Gwangju Institute of Science and Technology, 61005, Jouy-en-Josas, Republic of Korea
Meslier, Victoria (författare)
University Paris-Saclay, INRAE, MetaGenoPolis, 78350, Jouy-en-Josas, France
Bidkhori, Gholamreza (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK
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$$$Garcia-Guevara, Fernando (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK; Science for Life Laboratory, KTH – Royal Institute of Technology, SE-171 21, Stockholm, Sweden
Etienne-Mesmin, Lucie (författare)
Université Clermont Auvergne, INRAE, UMR 454 MEDIS, 28 place Henri Dunant, F-63000, Clermont-Ferrand, France, 28 place Henri Dunant
Clasen, Frederick (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK
Park, Junseok (författare)
Department of Bio and Brain Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, 305-701, Daejeon, Republic of Korea
Plaza Oñate, Florian (författare)
University Paris-Saclay, INRAE, MetaGenoPolis, 78350, Jouy-en-Josas, France
Cai, Haizhuang (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK
Le Chatelier, Emmanuelle (författare)
University Paris-Saclay, INRAE, MetaGenoPolis, 78350, Jouy-en-Josas, France
Pons, Nicolas (författare)
University Paris-Saclay, INRAE, MetaGenoPolis, 78350, Jouy-en-Josas, France
Pereira, Marcela (författare)
Centre for Translational Microbiome Research, Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, SE-171 77, Stockholm, Sweden
Seifert, Maike (författare)
Centre for Translational Microbiome Research, Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, SE-171 77, Stockholm, Sweden
Boulund, Fredrik (författare)
Centre for Translational Microbiome Research, Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, SE-171 77, Stockholm, Sweden
Engstrand, Lars (författare)
Centre for Translational Microbiome Research, Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, SE-171 77, Stockholm, Sweden
Lee, Doheon (författare)
Department of Bio and Brain Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, 305-701, Daejeon, Republic of Korea
Proctor, Gordon (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK
$$$Mardinoglu, Adil (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK; Science for Life Laboratory, KTH – Royal Institute of Technology, SE-171 21, Stockholm, Sweden
Blanquet-Diot, Stéphanie (författare)
Université Clermont Auvergne, INRAE, UMR 454 MEDIS, 28 place Henri Dunant, F-63000, Clermont-Ferrand, France, 28 place Henri Dunant
Moyes, David (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK
Almeida, Mathieu (författare)
University Paris-Saclay, INRAE, MetaGenoPolis, 78350, Jouy-en-Josas, France
Ehrlich, S. Dusko (författare)
University Paris-Saclay, INRAE, MetaGenoPolis, 78350, Jouy-en-Josas, France
$$$Uhlen, Mathias (författare)
Science for Life Laboratory, KTH – Royal Institute of Technology, SE-171 21, Stockholm, Sweden
$$$Shoaie, Saeed (författare)
Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, SE1 9RT, London, UK; Science for Life Laboratory, KTH – Royal Institute of Technology, SE-171 21, Stockholm, Sweden
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 (creator_code:org_t)
Nature Research, 2024
2024
Engelska.
Ingår i: npj Biofilms and Microbiomes. - : Nature Research. - 2055-5008. ; 10:1
Relaterad länk:
https://urn.kb.se/re...
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https://doi.org/10.1...
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  • Tidskriftsartikel (refereegranskat)
Abstract Ämnesord
Stäng  
  • Species composition of the healthy adult gut microbiota tends to be stable over time. Destabilization of the gut microbiome under the influence of different factors is the main driver of the microbial dysbiosis and subsequent impacts on host physiology. Here, we used metagenomics data from a Swedish longitudinal cohort, to determine the stability of the gut microbiome and uncovered two distinct microbial species groups; persistent colonizing species (PCS) and transient colonizing species (TCS). We validated the continuation of this grouping, generating gut metagenomics data for additional time points from the same Swedish cohort. We evaluated the existence of PCS/TCS across different geographical regions and observed they are globally conserved features. To characterize PCS/TCS phenotypes, we performed bioreactor fermentation with faecal samples and metabolic modeling. Finally, using chronic disease gut metagenome and other multi-omics data, we identified roles of TCS in microbial dysbiosis and link with abnormal changes to host physiology.

Ämnesord

NATURVETENSKAP  -- Biologi -- Mikrobiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Microbiology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)

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