Search: (WFRF:(Tomyshev Alexander)) pers:(Turner Jessica A.) pers:(Kochunov Peter) >
Machine Learning fo...
Machine Learning for Large-Scale Quality Control of 3D Shape Models in Neuroimaging
- Article/chapterEnglish2017
Publisher, publication year, extent ...
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2017-09-07
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Cham :Springer International Publishing,2017
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electronicrdacarrier
Numbers
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LIBRIS-ID:oai:DiVA.org:uu-440809
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https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-440809URI
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https://doi.org/10.1007/978-3-319-67389-9_43DOI
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http://kipublications.ki.se/Default.aspx?queryparsed=id:230035274URI
Supplementary language notes
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Language:English
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Summary in:English
Part of subdatabase
Classification
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Subject category:ref swepub-contenttype
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Subject category:art swepub-publicationtype
Notes
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As very large studies of complex neuroimaging phenotypes become more common, human quality assessment of MRI-derived data remains one of the last major bottlenecks. Few attempts have so far been made to address this issue with machine learning. In this work, we optimize predictive models of quality for meshes representing deep brain structure shapes. We use standard vertex-wise and global shape features computed homologously across 19 cohorts and over 7500 human-rated subjects, training kernelized Support Vector Machine and Gradient Boosted Decision Trees classifiers to detect meshes of failing quality. Our models generalize across datasets and diseases, reducing human workload by 30-70%, or equivalently hundreds of human rater hours for datasets of comparable size, with recall rates approaching inter-rater reliability.
Subject headings and genre
Added entries (persons, corporate bodies, meetings, titles ...)
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Gutman, Boris A
(author)
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Yu, Shih-Hua Julie
(author)
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van Erp, Theo G M
(author)
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Turner, Jessica A
(author)
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Schmaal, Lianne
(author)
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Veltman, Dick
(author)
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Wang, Lei
(author)
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Alpert, Kathryn
(author)
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Isaev, Dmitry
(author)
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Zavaliangos-Petropulu, Artemis
(author)
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Ching, Christopher R K
(author)
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Calhoun, Vince
(author)
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Glahn, David
(author)
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Satterthwaite, Theodore D
(author)
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Andreasen, Ole Andreas
(author)
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Borgwardt, Stefan
(author)
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Howells, Fleur
(author)
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Groenewold, Nynke
(author)
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Voineskos, Aristotle
(author)
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Radua, JoaquimKarolinska Institutet
(author)
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Potkin, Steven G
(author)
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Crespo-Facorro, Benedicto
(author)
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Tordesillas-Gutiérrez, Diana
(author)
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Shen, Li
(author)
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Lebedeva, Irina
(author)
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Spalletta, Gianfranco
(author)
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Donohoe, Gary
(author)
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Kochunov, Peter
(author)
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Rosa, Pedro G P
(author)
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James, Anthony
(author)
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Dannlowski, Udo
(author)
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Baune, Bernhard T
(author)
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Aleman, André
(author)
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Gotlib, Ian H
(author)
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Walter, Henrik
(author)
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Walter, Martin
(author)
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Soares, Jair CKarolinska Institutet
(author)
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Ehrlich, Stefan
(author)
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Gur, Ruben C
(author)
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Doan, N Trung
(author)
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Agartz, IngridKarolinska Institutet
(author)
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Westlye, Lars T
(author)
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Harrisberger, Fabienne
(author)
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Riecher-Rössler, Anita
(author)
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Uhlmann, Anne
(author)
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Stein, Dan J
(author)
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Dickie, Erin W
(author)
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Pomarol-Clotet, Edith
(author)
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Fuentes-Claramonte, Paola
(author)
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Canales-Rodríguez, Erick Jorge
(author)
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Salvador, Raymond
(author)
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Huang, Alexander J
(author)
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Roiz-Santiañez, Roberto
(author)
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Cong, Shan
(author)
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Tomyshev, Alexander
(author)
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Piras, Fabrizio
(author)
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Vecchio, Daniela
(author)
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Banaj, Nerisa
(author)
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Ciullo, Valentina
(author)
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Hong, Elliot
(author)
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Busatto, Geraldo
(author)
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Zanetti, Marcus V
(author)
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Serpa, Mauricio H
(author)
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Cervenka, SimonCentre for Psychiatry Research, Department of Clinical Neuroscience, Karolinska Institutet, Stockholm, Sweden(Swepub:uu)simce160
(author)
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Kelly, Sinead
(author)
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Grotegerd, Dominik
(author)
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Sacchet, Matthew D
(author)
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Veer, Ilya M
(author)
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Li, Meng
(author)
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Wu, Mon-Ju
(author)
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Irungu, Benson
(author)
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Walton, Esther
(author)
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Thompson, Paul M
(author)
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Karolinska InstitutetCentre for Psychiatry Research, Department of Clinical Neuroscience, Karolinska Institutet, Stockholm, Sweden
(creator_code:org_t)
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In:Machine learning in medical imaging. MLMI (Workshop)Cham : Springer International Publishing10541, s. 371-378
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Petrov, Dmitry
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Gutman, Boris A
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Yu, Shih-Hua Jul ...
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van Erp, Theo G ...
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Turner, Jessica ...
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Schmaal, Lianne
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Veltman, Dick
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Wang, Lei
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Alpert, Kathryn
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Isaev, Dmitry
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Zavaliangos-Petr ...
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Ching, Christoph ...
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Calhoun, Vince
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Glahn, David
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Satterthwaite, T ...
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Andreasen, Ole A ...
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Borgwardt, Stefa ...
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Howells, Fleur
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Groenewold, Nynk ...
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Voineskos, Arist ...
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Radua, Joaquim
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Potkin, Steven G
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Crespo-Facorro, ...
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Tordesillas-Guti ...
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Shen, Li
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Lebedeva, Irina
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Spalletta, Gianf ...
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Donohoe, Gary
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Kochunov, Peter
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Rosa, Pedro G P
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James, Anthony
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Dannlowski, Udo
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Baune, Bernhard ...
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Aleman, André
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Gotlib, Ian H
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Walter, Henrik
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Walter, Martin
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Soares, Jair C
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Ehrlich, Stefan
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Gur, Ruben C
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Doan, N Trung
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Agartz, Ingrid
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Westlye, Lars T
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Harrisberger, Fa ...
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Riecher-Rössler, ...
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Uhlmann, Anne
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Stein, Dan J
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Dickie, Erin W
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Pomarol-Clotet, ...
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Fuentes-Claramon ...
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Canales-Rodrígue ...
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Salvador, Raymon ...
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Huang, Alexander ...
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Roiz-Santiañez, ...
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Cong, Shan
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Tomyshev, Alexan ...
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Piras, Fabrizio
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Vecchio, Daniela
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Banaj, Nerisa
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Ciullo, Valentin ...
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Hong, Elliot
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Busatto, Geraldo
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Zanetti, Marcus ...
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Serpa, Mauricio ...
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Cervenka, Simon
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Kelly, Sinead
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Grotegerd, Domin ...
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Sacchet, Matthew ...
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Veer, Ilya M
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Li, Meng
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Wu, Mon-Ju
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Irungu, Benson
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Walton, Esther
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Thompson, Paul M
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- About the subject
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Clinical Medicin ...
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- By the university
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Uppsala University
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Karolinska Institutet