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Standards recommend...
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Lawniczak, Mara K. N.Wellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.
(author)
Standards recommendations for the Earth BioGenome Project
- Article/chapterEnglish2022
Publisher, publication year, extent ...
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2022-01-18
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Proceedings of the National Academy of Sciences (PNAS),2022
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electronicrdacarrier
Numbers
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LIBRIS-ID:oai:DiVA.org:uu-470675
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https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-470675URI
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https://doi.org/10.1073/pnas.2115639118DOI
Supplementary language notes
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Language:English
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Summary in:English
Part of subdatabase
Classification
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Subject category:ref swepub-contenttype
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Subject category:art swepub-publicationtype
Notes
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A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer members from the global genomics scientific community: Sample Collection and Processing, Sequencing and Assembly, Annotation, Analysis, and IT and Informatics. The current versions of the resulting standards documents are available on the EBP website, with the recognition that opportunities, technologies, and challenges may improve or change in the future, requiring flexibility for the EBP to meet its goals. Here, we describe some highlights from the proposed standards, and areas where additional challenges will need to be met.
Subject headings and genre
Added entries (persons, corporate bodies, meetings, titles ...)
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Durbin, RichardWellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.;Univ Cambridge, Dept Genet, Cambridge CB3 0DH, England.
(author)
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Flicek, PaulWellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.;European Bioinformat Inst, European Mol Biol Lab, Wellcome Genome Campus, Cambridge CB10 1SD, England.
(author)
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Lindblad-Toh, KerstinUppsala universitet,Institutionen för medicinsk biokemi och mikrobiologi,Science for Life Laboratory, SciLifeLab,Broad Inst MIT & Harvard, Cambridge, MA 02142 USA(Swepub:uu)kerli865
(author)
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Wei, XiaofengChina Natl GeneBank, Shenzhen 518120, Peoples R China.
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Archibald, John M.Dalhousie Univ, Dept Biochem & Mol Biol, Halifax, NS B3H 4R2, Canada.
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Baker, William J.Royal Bot Gardens, Dept Accelerated Taxon, Surrey TW9 3AE, England.
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Belov, KatherineUniv Sydney, Sch Life & Environm Sci, Fac Sci, Sydney, NSW 2006, Australia.
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Blaxter, Mark L.Wellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.
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Bonet, Tomas MarquesUniv Pompeau Fabra, Consejo Super Invest Cientificas, Inst Evolutionary Biol, Parc Rechercha Biomed Barcelona, Barcelona 08003, Spain.;Catalan Inst Res & Adv Studies, Barcelona 08010, Spain.;Barcelona Inst Sci & Technol, Ctr Nacl Analisi Geonom, Ctr Genom Regulat, Barcelona 08028, Spain.;USDA, ARS, Beltsville Agr Res Ctr, Bee Res Lab, Beltsville, MD 20705 USA.
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Childers, Anna K.Natl Museum Nat Hist, Smithsonian Inst, Washington, DC 20560 USA.
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Coddington, Jonathan A.
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Crandall, Keith A.George Washington Univ, Computat Biol Inst, Washington, DC 20052 USA.;George Washington Univ, Milken Inst, Sch Publ Hlth, Dept Biostat & Bioinformat, Washington, DC 20052 USA.
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Crawford, Andrew J.Univ Los Andes, Dept Biol Sci, Bogota 111711, Colombia.
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Davey, Robert P.Earlham Inst, Engn Biol, Norwich Res Pk, Norwich NR4 7UZ, Norfolk, England.
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Di Palma, FedericaGenome British Columbia, Vancouver, BC V5Z 0C4, Canada.
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Fang, QiBGI Shenzhen, Beishan Ind Zone, Shenzhen 518083, Peoples R China.
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Haerty, WilfriedEarlham Inst, Res Pk, Norwich NR4 7UZ, Norfolk, England.
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Hall, NeilGenome British Columbia, Vancouver, BC V5Z 0C4, Canada.;Earlham Inst, Res Pk, Norwich NR4 7UZ, Norfolk, England.
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Hoff, Katharina J.Univ Greifswald, Ctr Funct Genom Microbes, Inst Math & Comp Sci, D-17489 Greifswald, Germany.
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Howe, KerstinWellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.
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Jarvis, Erich D.Rockefeller Univ, Vertebrate Genomes Lab, New York, NY 10065 USA.;HHMI, Chevy Chase, MD 20815 USA.
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Johnson, Warren E.Smithsonian Conservat Biol Inst, Ctr Species Survival, Natl Zool Pk, Front Royal, VA 22630 USA.
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Johnson, Rebecca N.
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Kersey, Paul J.Smithsonian Inst, Walter Reed Biosystemat Unit, Museum Support Ctr MRC 534, Suitland, MD 20746 USA.;European Bioinformat Inst, European Mol Biol Lab, Cambridge CB10 1SD, England.
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Liu, XinChina Natl GeneBank, Shenzhen 518120, Peoples R China.
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Lopez, Jose VictorNova Southeastern Univ, Halmos Coll Arts & Sci, Guy Harvey Oceanog Ctr, Dania, FL 33004 USA.
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Myers, Eugene W.Max Planck Inst Mol Cell Biol & Genet, Dept Syst Biol, D-01307 Dresden, Germany.
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Vinnere Pettersson, OlgaUppsala universitet,Science for Life Laboratory, SciLifeLab(Swepub:uu)olvin020
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Phillippy, Adam M.NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20894 USA.
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Poelchau, Monica F.USDA ARS, Natl Agr Lib, Beltsville, MD 20705 USA.
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Pruitt, Kim D.Natl Ctr Biotechnol Informat, Natl Lib Med, NIH, Bethesda, MD 20894 USA.
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Rhie, ArangNHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20894 USA.
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Castilla-Rubio, Juan CarlosSpacetime Ventures, BR-05449050 Sao Paulo, Brazil.
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Sahu, Sunil KumarChina Natl GeneBank, Shenzhen 518120, Peoples R China.;BGI Shenzhen, Beishan Ind Zone, Shenzhen 518083, Peoples R China.;Earlham Inst, Res Pk, Norwich NR4 7UZ, Norfolk, England.
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Salmon, Nicholas A.Wellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.
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Soltis, Pamela S.Univ Florida, Florida Museum Nat Hist, Gainesville, FL 32611 USA.
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Swarbreck, DavidUniv Greifswald, Ctr Funct Genom Microbes, Inst Math & Comp Sci, D-17489 Greifswald, Germany.
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Thibaud-Nissen, FrancoiseNatl Ctr Biotechnol Informat, Natl Lib Med, NIH, Bethesda, MD 20894 USA.
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Wang, SiboChina Natl GeneBank, Shenzhen 518120, Peoples R China.
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Wegrzyn, Jill L.Univ Connecticut, Dept Ecol & Evolutionary Biol, Storrs, CT 06269 USA.;Univ Connecticut, Inst Syst Genom, Computat Biol Core, Storrs, CT 06269 USA.
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Zhang, GuojieUniv Copenhagen, Sect Ecol & Evolut, Dept Biol, Villum Ctr Biodivers Genom, DK-1165 Copenhagen, Denmark.;China Natl Genebank, BGI Shenzhen, Shenzhen 518083, Peoples R China.;Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Kunming 650223, Yunnan, Peoples R China.;Chinese Acad Sci, Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China.
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Zhang, HeBGI Qingdao, BGI Shenzhen, Qingdao 266555, Peoples R China.
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Lewin, Harris A.Univ Calif Davis, Univ Calif Davis Genome Ctr, Davis, CA 95616 USA.;Univ Calif Davis, Dept Evolut & Ecol, Davis, CA 95616 USA.
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Richards, StephenUniv Calif Davis, Univ Calif Davis Genome Ctr, Davis, CA 95616 USA.
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Wellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.Wellcome Sanger Inst, Wellcome Genome Campus, Hinxton CB10 1SA, England.;Univ Cambridge, Dept Genet, Cambridge CB3 0DH, England.
(creator_code:org_t)
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In:Proceedings of the National Academy of Sciences of the United States of America: Proceedings of the National Academy of Sciences (PNAS)119:40027-84241091-6490
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Lawniczak, Mara ...
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Durbin, Richard
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Flicek, Paul
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Lindblad-Toh, Ke ...
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Wei, Xiaofeng
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Archibald, John ...
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Baker, William J ...
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Belov, Katherine
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Blaxter, Mark L.
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Bonet, Tomas Mar ...
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Childers, Anna K ...
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Coddington, Jona ...
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Crandall, Keith ...
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Crawford, Andrew ...
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Davey, Robert P.
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Di Palma, Federi ...
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Fang, Qi
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Haerty, Wilfried
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Hall, Neil
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Hoff, Katharina ...
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Howe, Kerstin
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Jarvis, Erich D.
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Johnson, Warren ...
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Johnson, Rebecca ...
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Kersey, Paul J.
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Liu, Xin
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Lopez, Jose Vict ...
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Myers, Eugene W.
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Vinnere Petterss ...
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Phillippy, Adam ...
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Poelchau, Monica ...
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Pruitt, Kim D.
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Rhie, Arang
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Castilla-Rubio, ...
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Sahu, Sunil Kuma ...
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Salmon, Nicholas ...
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Soltis, Pamela S ...
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Swarbreck, David
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Thibaud-Nissen, ...
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Wang, Sibo
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Wegrzyn, Jill L.
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Zhang, Guojie
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Zhang, He
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Lewin, Harris A.
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Richards, Stephe ...
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