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Global Brassicaceae...
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Hendriks, Kasper P.Univ Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.;Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.
(författare)
Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset
- Artikel/kapitelEngelska2023
Förlag, utgivningsår, omfång ...
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Elsevier,2023
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electronicrdacarrier
Nummerbeteckningar
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LIBRIS-ID:oai:DiVA.org:uu-516558
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https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-516558URI
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https://doi.org/10.1016/j.cub.2023.08.026DOI
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Språk:engelska
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Sammanfattning på:engelska
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Ämneskategori:ref swepub-contenttype
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Ämneskategori:art swepub-publicationtype
Anmärkningar
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The mustard family (Brassicaceae) is a scientifically and economically important family, containing the model plant Arabidopsis thaliana and numerous crop species that feed billions worldwide. Despite its relevance, most phylogenetic trees of the family are incompletely sampled and often contain poorly supported branches. Here, we present the most complete Brassicaceae genus-level family phylogenies to date (Bras-sicaceae Tree of Life or BrassiToL) based on nuclear (1,081 genes, 319 of the 349 genera; 57 of the 58 tribes) and plastome (60 genes, 265 genera; all tribes) data. We found cytonuclear discordance between the two, which is likely a result of rampant hybridization among closely and more distantly related lineages. To eval-uate the impact of such hybridization on the nuclear phylogeny reconstruction, we performed five different gene sampling routines, which increasingly removed putatively paralog genes. Our cleaned subset of 297 genes revealed high support for the tribes, whereas support for the main lineages (supertribes) was moder-ate. Calibration based on the 20 most clock-like nuclear genes suggests a late Eocene to late Oligocene origin of the family. Finally, our results strongly support a recently published new family classification, dividing the family into two subfamilies (one with five supertribes), together representing 58 tribes. This includes five recently described or re-established tribes, including Arabidopsideae, a monogeneric tribe accommodating Arabidopsis without any close relatives. With a worldwide community of thousands of researchers working on Brassicaceae and its diverse members, our new genus-level family phylogeny will be an indispensable tool for studies on biodiversity and plant biology.
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Kiefer, ChristianeHeidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.
(författare)
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Al-Shehbaz, Ihsan A.Missouri Bot Garden, 4344 Shaw Blvd, St. Louis, MO 63110 USA.
(författare)
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Bailey, C. DonovanNew Mexico State Univ, Dept Biol, POB 30001, MSC 3AF, Las Cruces, NM 88003 USA.
(författare)
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van Huysduynen, Alex HooftNat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.;Univ Antwerp, Dept Biol, Groenenborgerlaan 171, B-2020 Antwerp, Belgium.
(författare)
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Nikolov, Lachezar A.Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, 610 Charles E Young Dr S, Los Angeles, CA 90095 USA.
(författare)
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Nauheimer, LarsJames Cook Univ, Australian Trop Herbarium, POB 6811, Cairns, Qld 4870, Australia.
(författare)
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Zuntini, Alexandre R.Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.
(författare)
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German, Dmitry A.Altai State Univ, South Siberian Bot Garden, Lesosechnaya Ulitsa, 25, Barnaul, Altai Krai, Russia.
(författare)
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Franzke, AndreasHeidelberg Univ, Heidelberg Bot Garden, Neuenheimer Feld 361, D-69120 Heidelberg, Germany.
(författare)
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Koch, Marcus A.Heidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.
(författare)
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Lysak, Martin A.Masaryk Univ, CEITEC Cent European Inst Technol, Kamenice 5, Brno 62500, Czech Republic.
(författare)
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Toro-Nunez, OscarUniv Concepcion, Barrio Univ, Dept Bot, Concepcion, Chile.
(författare)
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Ozudogru, BarisHacettepe Univ, Dept Biol, TR-06800 Ankara, Turkiye.
(författare)
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Invernon, Vanessa R.Sorbonne Univ, Museum Natl dHist Nat CNRS, Inst Systemat Evolut Biodivers ISYEB, EPHE, UA 57 rue Cuvier,CP 51, F-75005 Paris, France.
(författare)
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Walden, NoraHeidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.
(författare)
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Maurin, OlivierRoyal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.
(författare)
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Hay, Nikolai M.Duke Univ, Dept Biol, Durham, NC 27708 USA.
(författare)
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Shushkov, PhilipIndiana Univ, Dept Chem, 800 E Kirkwood Ave, Bloomington, IN 47405 USA.
(författare)
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Mandakova, TerezieMasaryk Univ, CEITEC Cent European Inst Technol, Kamenice 5, Brno 62500, Czech Republic.
(författare)
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Schranz, M. EricWageningen Univ, Biosystemat Grp, Droevendaalsesteeg 1, NL-6708 PB Wageningen, Netherlands.
(författare)
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Thulin, Mats,1948-Uppsala universitet,Systematisk biologi(Swepub:uu)matsthul
(författare)
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Windham, Michael D.Duke Univ, Dept Biol, Durham, NC 27708 USA.
(författare)
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Resetnik, IvanaUniv Zagreb, Dept Biol, Marulicev trg 20-2, Zagreb 10000, Croatia.
(författare)
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Spaniel, StanislavSlovak Acad Sci, Inst Bot, Plant Sci & Biodivers Ctr, Dubravskacesta 9, Bratislava 84523, Slovakia.
(författare)
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Ly, ElfyNat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.;European Ctr Excellence Sustainable Water Technol, Wetsus, Oostergoweg 9, NL-8911 MA Leeuwarden, Netherlands.;Delft Univ Technol, Dept Biotechnol, Maasweg 9, NL-2629 HZ Delft, Netherlands.
(författare)
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Pires, J. ChrisColorado State Univ, Soil & Crop Sci, 307 Univ Ave, Ft Collins, CO 80523 USA.
(författare)
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Harkess, AlexHudsonAlpha Inst Biotechnol, 601 Genome Way Northwest, Huntsville, AL 35806 USA.
(författare)
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Neuffer, BarbaraUniv Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.
(författare)
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Vogt, RobertBot Garten & Bot Museum Berlin, Konigin Luise Str 6-8, D-14195 Berlin, Germany.
(författare)
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Brauchler, ChristianNat Hist Museum Vienna, Dept Bot, Burgring 7, A-1010 Vienna, Austria.
(författare)
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Rainer, HeimoNat Hist Museum Vienna, Dept Bot, Burgring 7, A-1010 Vienna, Austria.
(författare)
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Janssens, Steven B.Katholieke Univ Leuven, Dept Biol, Kasteelpark Arenberg 31, POB 2435, B-3001 Leuven, Belgium.;Meise Bot Garden, Nieuwelaan 38, B-1860 Meise, Belgium.
(författare)
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Schmull, MichaelaHarvard Univ Herbaria, 22 Divin Ave, Cambridge, MA 02138 USA.
(författare)
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Forrest, AlanRoyal Bot Garden Edinburgh, Ctr Middle Eastern Plants, 20A Inverleith Row, Edinburgh EH3 5LR, Midlothian, Scotland.
(författare)
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Guggisberg, AlessiaSwiss Fed Inst Technol, Inst Integrat Biol, CH-8092 Zurich, Switzerland.
(författare)
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Zmarzty, SueRoyal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.
(författare)
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Lepschi, Brendan J.Australian Natl Herbarium, Ctr Australian Natl Biodivers Res, Clunies Ross St, Acton, ACT 2601, Australia.
(författare)
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Scarlett, NevilleLa Trobe Univ, Plenty Rd & Kingsbury Dr, Bundoora, Vic 3086, Australia.
(författare)
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Stauffer, Fred W.Conservat & Bot Gardens Geneva, CP 60, CH-1292 Geneva, Switzerland.
(författare)
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Schonberger, InesAllan Herbarium, Manaaki Whenua Landcare Res, POB 69040, Lincoln 7640, New Zealand.
(författare)
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Heenan, PeterAllan Herbarium, Manaaki Whenua Landcare Res, POB 69040, Lincoln 7640, New Zealand.
(författare)
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Baker, William J.Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.
(författare)
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Forest, FelixRoyal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.
(författare)
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Mummenhoff, KlausUniv Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.
(författare)
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Lens, FredericNat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.;Leiden Univ, Inst Biol Leiden, Plant Sci, Sylviusweg 72, NL-2333 BE Leiden, Netherlands.
(författare)
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Univ Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.;Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.Heidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.
(creator_code:org_t)
Sammanhörande titlar
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Ingår i:Current Biology: Elsevier33:19, s. 4052-40680960-98221879-0445
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Hendriks, Kasper ...
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Kiefer, Christia ...
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Al-Shehbaz, Ihsa ...
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Bailey, C. Donov ...
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van Huysduynen, ...
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Nikolov, Lacheza ...
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visa fler...
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Nauheimer, Lars
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Zuntini, Alexand ...
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German, Dmitry A ...
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Franzke, Andreas
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Koch, Marcus A.
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Lysak, Martin A.
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Toro-Nunez, Osca ...
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Ozudogru, Baris
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Invernon, Vaness ...
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Walden, Nora
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Maurin, Olivier
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Hay, Nikolai M.
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Shushkov, Philip
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Mandakova, Terez ...
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Schranz, M. Eric
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Thulin, Mats, 19 ...
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Windham, Michael ...
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Resetnik, Ivana
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Spaniel, Stanisl ...
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Ly, Elfy
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Pires, J. Chris
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Harkess, Alex
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Neuffer, Barbara
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Vogt, Robert
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Brauchler, Chris ...
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Rainer, Heimo
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Janssens, Steven ...
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Schmull, Michael ...
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Forrest, Alan
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Guggisberg, Ales ...
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Zmarzty, Sue
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Lepschi, Brendan ...
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Scarlett, Nevill ...
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Stauffer, Fred W ...
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Schonberger, Ine ...
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Heenan, Peter
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Baker, William J ...
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Forest, Felix
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Mummenhoff, Klau ...
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Lens, Frederic
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