Codon bias in Escherichia coli: The influence of codon context on mutation and selection

• The codon bias in Escherichia coli for all two-fold degenerate amino acids was studied as dependent on the context from the six bases in the nearest surrounding codons. By comparing the results in genes at different expression levels, effects that are due

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SYNONYMOUS SUBSTITUTION-RATE; SHORT PATCH REPAIR; MISMATCH REPAIR; GENE-EXPRESSION; USAGE BIAS; VSP REPAIR; RNA; TRANSLATION; GROWTH; GENOME

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