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Evaluation of two s...
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Lexander, Helena
(författare)
Evaluation of two sample preparation methods for prostate proteome analysis
- Artikel/kapitelEngelska2006
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Wiley,2006
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LIBRIS-ID:oai:DiVA.org:uu-81673
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https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-81673URI
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https://doi.org/10.1002/pmic.200600104DOI
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http://kipublications.ki.se/Default.aspx?queryparsed=id:1960062URI
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Språk:engelska
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Sammanfattning på:engelska
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Ämneskategori:art swepub-publicationtype
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For laboratory techniques that require well-preserved proteins, such as 2-DE, fresh tissue must be harvested and processed as fast as possible to avoid proteolytic degradation. We describe a modified method for harvesting tissue from radical prostatectomy specimens for proteome analysis and compare it with the standard technique. Cells were scraped from cut surfaces of 11 prostate specimens. A fraction of the material was smeared on a glass slide and Giemsa stained for morphological control. The sample was collected in a medium with protease inhibitors, and the protein material was prepared for 2-DE. Filtering and Percoll centrifugation were omitted. Sample locations were noted on a specimen map. From the same area, a tissue block was harvested for comparison. The block was processed with the conventional technique including mechanical disintegration, filtering and Percoll centrifugation. Quality measures of 2-DE were similar with both methods. With the scrape sampling technique, control smears showed abundant epithelial cells and a cleaner background and processing was faster than with tissue block sampling. For proteomic analysis, the scrape sample technique has several advantages over the tissue block method.
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Biuppslag (personer, institutioner, konferenser, titlar ...)
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Hellman, UlfUppsala universitet,Ludwiginstitutet för cancerforskning(Swepub:uu)ulfhm
(författare)
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Palmberg, CarinaKarolinska Institutet
(författare)
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Auer, GertKarolinska Institutet
(författare)
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Hellström, MagnusKarolinska Institutet
(författare)
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Franzén, BoKarolinska Institutet
(författare)
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Jörnvall, HansKarolinska Institutet
(författare)
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Egevad, LarsKarolinska Institutet
(författare)
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Uppsala universitetLudwiginstitutet för cancerforskning
(creator_code:org_t)
Sammanhörande titlar
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Ingår i:Proteomics: Wiley6:13, s. 3918-39251615-98531615-9861
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