id:"swepub:oai:gup.ub.gu.se/105976"
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- Lindlöf, AngelicaHögskolan i Skövde,Forskningscentrum för Systembiologi,Institutionen för vård och natur (author)
In silico analysis of promoter regions from cold-induced genes in rice (Oryza sativa L.) and Arabidopsis thaliana reveals the importance of combinatorial control
- Article/chapterEnglish2009
Publisher, publication year, extent ...
- 2009-03-25
- Oxford University Press (OUP),2009
Numbers
- LIBRIS-ID:oai:gup.ub.gu.se/105976
- https://gup.ub.gu.se/publication/105976URI
- https://doi.org/10.1093/bioinformatics/btp172DOI
- https://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-3297URI
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- Language:English
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- Motivation: Cold acclimation involves a number of different cellular processes that together increase the freezing tolerance of an organism. The DREB1/CBFs are transcription factors (TFs) that are prominent in the regulation of cold responses in Arabidopsis thaliana, rice and many other crops. We investigated if the expression of DREB1/CBFs and co-expressed genes relies on combinatorial control by several TFs. Our results support this notion and indicate that methods for studying the regulation of complex cellular processes should include identification of combinations of motifs, in addition to searching for individual overrepresented binding sites.
Subject headings and genre
- NATURVETENSKAP Biologi hsv//swe
- NATURAL SCIENCES Biological Sciences hsv//eng
- DNA-BINDING ACTIVITY; TRANSCRIPTION FACTORS; REGULATORY ELEMENTS; LOW-TEMPERATURE; EXPRESSION; DROUGHT; ACTIVATORS; DISCOVERY; SEQUENCES; NETWORKS
- Natural sciences
Added entries (persons, corporate bodies, meetings, titles ...)
- Bräutigam, Marcus,1968Gothenburg University,Göteborgs universitet,Institutionen för cell- och molekylärbiologi,Department of Cell and Molecular Biology,Department of Cell and Molecular Biology, Medicinaregatan 9C, Box 462, SE405 30 Göteborg, Sweden(Swepub:gu)xbraum (author)
- Chawade, Aakash,1980Gothenburg University,Göteborgs universitet,Institutionen för växt- och miljövetenskaper,Department of Plant and Environmental Sciences,Department of Plant and Environmental Sciences, Gothenburg University, Box 461, SE405 30 Göteborg, Sweden(Swepub:gu)xchaaa (author)
- Olsson, Olof,1950Gothenburg University,Göteborgs universitet,Institutionen för växt- och miljövetenskaper,Department of Plant and Environmental Sciences,Department of Plant and Environmental Sciences, Gothenburg University, Box 461, SE405 30 Göteborg, Sweden(Swepub:gu)xoolov (author)
- Olsson, BjörnHögskolan i Skövde,Forskningscentrum för Systembiologi,Institutionen för vård och natur(Swepub:his)olsb (author)
- Högskolan i SkövdeForskningscentrum för Systembiologi (creator_code:org_t)
Related titles
- In:Bioinformatics: Oxford University Press (OUP)25:11, s. 1345-13481367-48031367-4811
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