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Hundreds of variant...
Hundreds of variants clustered in genomic loci and biological pathways affect human height.
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Lango Allen, Hana (author)
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Estrada, Karol (author)
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Lettre, Guillaume (author)
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show more...
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Berndt, Sonja I (author)
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Weedon, Michael N (author)
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Rivadeneira, Fernando (author)
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Willer, Cristen J (author)
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Jackson, Anne U (author)
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Vedantam, Sailaja (author)
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Raychaudhuri, Soumya (author)
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Ferreira, Teresa (author)
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Wood, Andrew R (author)
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Weyant, Robert J (author)
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Segrè, Ayellet V (author)
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Speliotes, Elizabeth K (author)
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Wheeler, Eleanor (author)
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Soranzo, Nicole (author)
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Park, Ju-Hyun (author)
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Yang, Jian (author)
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Gudbjartsson, Daniel (author)
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Heard-Costa, Nancy L (author)
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Randall, Joshua C (author)
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Qi, Lu (author)
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Vernon Smith, Albert (author)
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Mägi, Reedik (author)
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Pastinen, Tomi (author)
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Liang, Liming (author)
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Heid, Iris M (author)
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Luan, Jian'an (author)
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Thorleifsson, Gudmar (author)
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Winkler, Thomas W (author)
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Goddard, Michael E (author)
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Sin Lo, Ken (author)
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Palmer, Cameron (author)
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Workalemahu, Tsegaselassie (author)
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Aulchenko, Yurii S (author)
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- Johansson, Åsa (author)
- Uppsala universitet,Institutionen för genetik och patologi
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Zillikens, M Carola (author)
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Feitosa, Mary F (author)
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Esko, Tõnu (author)
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Johnson, Toby (author)
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Ketkar, Shamika (author)
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Kraft, Peter (author)
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Mangino, Massimo (author)
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Prokopenko, Inga (author)
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Absher, Devin (author)
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Albrecht, Eva (author)
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Ernst, Florian (author)
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Glazer, Nicole L (author)
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Hayward, Caroline (author)
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Hottenga, Jouke-Jan (author)
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Jacobs, Kevin B (author)
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Knowles, Joshua W (author)
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Kutalik, Zoltan (author)
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Monda, Keri L (author)
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Polasek, Ozren (author)
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Preuss, Michael (author)
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Rayner, Nigel W (author)
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Robertson, Neil R (author)
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Steinthorsdottir, Valgerdur (author)
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Tyrer, Jonathan P (author)
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Voight, Benjamin F (author)
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- Wiklund, Fredrik (author)
- Karolinska Institutet
-
Xu, Jianfeng (author)
-
Hua Zhao, Jing (author)
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Nyholt, Dale R (author)
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Pellikka, Niina (author)
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Perola, Markus (author)
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Perry, John R B (author)
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Surakka, Ida (author)
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Tammesoo, Mari-Liis (author)
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Altmaier, Elizabeth L (author)
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Amin, Najaf (author)
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Aspelund, Thor (author)
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Bhangale, Tushar (author)
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Boucher, Gabrielle (author)
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Chasman, Daniel I (author)
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Chen, Constance (author)
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Coin, Lachlan (author)
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Cooper, Matthew N (author)
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Dixon, Anna L (author)
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Gibson, Quince (author)
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Grundberg, Elin (author)
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Hao, Ke (author)
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Juhani Junttila, M (author)
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Kaplan, Lee M (author)
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Kettunen, Johannes (author)
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König, Inke R (author)
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Kwan, Tony (author)
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Lawrence, Robert W (author)
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Levinson, Douglas F (author)
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- Lorentzon, Mattias, 1970 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för medicin, avdelningen för invärtesmedicin,Institute of Medicine, Department of Internal Medicine
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McKnight, Barbara (author)
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Morris, Andrew P (author)
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Muller, Martina (author)
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Suh Ngwa, Julius (author)
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Purcell, Shaun (author)
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Rafelt, Suzanne (author)
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Salem, Rany M (author)
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Salvi, Erika (author)
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Sanna, Serena (author)
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Shi, Jianxin (author)
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Sovio, Ulla (author)
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Thompson, John R (author)
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Turchin, Michael C (author)
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- Vandenput, Liesbeth, 1974 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för medicin, avdelningen för invärtesmedicin,Institute of Medicine, Department of Internal Medicine
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Verlaan, Dominique J (author)
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Vitart, Veronique (author)
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White, Charles C (author)
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Ziegler, Andreas (author)
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- Almgren, Peter (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Genomics, Diabetes and Endocrinology,Lund University Research Groups
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Balmforth, Anthony J (author)
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Campbell, Harry (author)
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Citterio, Lorena (author)
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De Grandi, Alessandro (author)
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Dominiczak, Anna (author)
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Duan, Jubao (author)
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Elliott, Paul (author)
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Elosua, Roberto (author)
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Eriksson, Johan G (author)
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Freimer, Nelson B (author)
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Geus, Eco J C (author)
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Glorioso, Nicola (author)
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Haiqing, Shen (author)
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Hartikainen, Anna-Liisa (author)
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Havulinna, Aki S (author)
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Hicks, Andrew A (author)
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Hui, Jennie (author)
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- Igl, Wilmar (author)
- Uppsala universitet,Institutionen för genetik och patologi
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Illig, Thomas (author)
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Jula, Antti (author)
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Kajantie, Eero (author)
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Kilpeläinen, Tuomas O (author)
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Koiranen, Markku (author)
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Kolcic, Ivana (author)
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Koskinen, Seppo (author)
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Kovacs, Peter (author)
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Laitinen, Jaana (author)
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Liu, Jianjun (author)
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Lokki, Marja-Liisa (author)
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Marusic, Ana (author)
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Maschio, Andrea (author)
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Meitinger, Thomas (author)
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Mulas, Antonella (author)
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Paré, Guillaume (author)
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Parker, Alex N (author)
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Peden, John F (author)
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Petersmann, Astrid (author)
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Pichler, Irene (author)
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- Pietiläinen, Kirsi H (author)
- Karolinska Institutet
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Pouta, Anneli (author)
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Ridderstråle, Martin (author)
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Rotter, Jerome I (author)
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Sambrook, Jennifer G (author)
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Sanders, Alan R (author)
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Oliver Schmidt, Carsten (author)
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Sinisalo, Juha (author)
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Smit, Jan H (author)
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Stringham, Heather M (author)
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Bragi Walters, G (author)
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Widen, Elisabeth (author)
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Wild, Sarah H (author)
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Willemsen, Gonneke (author)
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Zagato, Laura (author)
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Zgaga, Lina (author)
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Zitting, Paavo (author)
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Alavere, Helene (author)
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Farrall, Martin (author)
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McArdle, Wendy L (author)
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Nelis, Mari (author)
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Peters, Marjolein J (author)
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Ripatti, Samuli (author)
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van Meurs, Joyce B J (author)
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Aben, Katja K (author)
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Ardlie, Kristin G (author)
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Beckmann, Jacques S (author)
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Beilby, John P (author)
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Bergman, Richard N (author)
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Bergmann, Sven (author)
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Collins, Francis S (author)
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Cusi, Daniele (author)
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den Heijer, Martin (author)
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Eiriksdottir, Gudny (author)
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Gejman, Pablo V (author)
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Hall, Alistair S (author)
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- Hamsten, Anders (author)
- Karolinska Institutet
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Huikuri, Heikki V (author)
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Iribarren, Carlos (author)
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Kähönen, Mika (author)
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Kaprio, Jaakko (author)
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Kathiresan, Sekar (author)
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Kiemeney, Lambertus (author)
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Kocher, Thomas (author)
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Launer, Lenore J (author)
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Lehtimäki, Terho (author)
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Melander, Olle (author)
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Mosley, Tom H (author)
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Musk, Arthur W (author)
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Nieminen, Markku S (author)
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O'Donnell, Christopher J (author)
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- Ohlsson, Claes, 1965 (author)
- Gothenburg University,Göteborgs universitet,Centre for Bone and Arthritis Research,Institutionen för medicin, avdelningen för invärtesmedicin,Institute of Medicine, Department of Internal Medicine
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Oostra, Ben (author)
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Palmer, Lyle J (author)
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Raitakari, Olli (author)
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Ridker, Paul M (author)
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Rioux, John D (author)
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Rissanen, Aila (author)
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Rivolta, Carlo (author)
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Schunkert, Heribert (author)
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Shuldiner, Alan R (author)
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Siscovick, David S (author)
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Stumvoll, Michael (author)
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Tönjes, Anke (author)
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Tuomilehto, Jaakko (author)
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van Ommen, Gert-Jan (author)
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Viikari, Jorma (author)
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Heath, Andrew C (author)
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Martin, Nicholas G (author)
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Montgomery, Grant W (author)
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Province, Michael A (author)
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Kayser, Manfred (author)
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Arnold, Alice M (author)
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Atwood, Larry D (author)
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Boerwinkle, Eric (author)
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Chanock, Stephen J (author)
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Deloukas, Panos (author)
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Gieger, Christian (author)
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- Grönberg, Henrik (author)
- Karolinska Institutet
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Hall, Per (author)
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Hattersley, Andrew T (author)
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Hengstenberg, Christian (author)
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Hoffman, Wolfgang (author)
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Mark Lathrop, G (author)
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Salomaa, Veikko (author)
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Schreiber, Stefan (author)
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Uda, Manuela (author)
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Waterworth, Dawn (author)
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Wright, Alan F (author)
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Assimes, Themistocles L (author)
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Barroso, Ines (author)
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Hofman, Albert (author)
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Mohlke, Karen L (author)
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Boomsma, Dorret I (author)
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Caulfield, Mark J (author)
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Adrienne Cupples, L (author)
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Erdmann, Jeanette (author)
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Fox, Caroline S (author)
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Gudnason, Vilmundur (author)
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- Gyllensten, Ulf (author)
- Uppsala universitet,Institutionen för genetik och patologi
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Harris, Tamara B (author)
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Hayes, Richard B (author)
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Jarvelin, Marjo-Riitta (author)
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Mooser, Vincent (author)
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Munroe, Patricia B (author)
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Ouwehand, Willem H (author)
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Penninx, Brenda W (author)
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Pramstaller, Peter P (author)
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Quertermous, Thomas (author)
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Rudan, Igor (author)
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Samani, Nilesh J (author)
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Spector, Timothy D (author)
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Völzke, Henry (author)
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Watkins, Hugh (author)
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Wilson, James F (author)
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- Groop, Leif (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Genomics, Diabetes and Endocrinology,Lund University Research Groups
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Haritunians, Talin (author)
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Hu, Frank B (author)
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Kaplan, Robert C (author)
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Metspalu, Andres (author)
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North, Kari E (author)
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Schlessinger, David (author)
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Wareham, Nicholas J (author)
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Hunter, David J (author)
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O'Connell, Jeffrey R (author)
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Strachan, David P (author)
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Wichmann, H-Erich (author)
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Borecki, Ingrid B (author)
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van Duijn, Cornelia M (author)
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Schadt, Eric E (author)
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Thorsteinsdottir, Unnur (author)
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Peltonen, Leena (author)
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Uitterlinden, Andre G (author)
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Visscher, Peter M (author)
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Chatterjee, Nilanjan (author)
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Loos, Ruth J F (author)
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Boehnke, Michael (author)
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McCarthy, Mark I (author)
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- Ingelsson, Erik (author)
- Karolinska Institutet
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Lindgren, Cecilia M (author)
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Abecasis, Gonçalo R (author)
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Stefansson, Kari (author)
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Frayling, Timothy M (author)
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Hirschhorn, Joel N (author)
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(creator_code:org_t)
- 2010-09-29
- 2010
- English.
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In: Nature. - : Springer Science and Business Media LLC. - 1476-4687 .- 0028-0836. ; 467:7317, s. 832-8
- Related links:
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Abstract
Subject headings
Close
- Most common human traits and diseases have a polygenic pattern of inheritance: DNA sequence variants at many genetic loci influence the phenotype. Genome-wide association (GWA) studies have identified more than 600 variants associated with human traits, but these typically explain small fractions of phenotypic variation, raising questions about the use of further studies. Here, using 183,727 individuals, we show that hundreds of genetic variants, in at least 180 loci, influence adult height, a highly heritable and classic polygenic trait. The large number of loci reveals patterns with important implications for genetic studies of common human diseases and traits. First, the 180 loci are not random, but instead are enriched for genes that are connected in biological pathways (P = 0.016) and that underlie skeletal growth defects (P<0.001). Second, the likely causal gene is often located near the most strongly associated variant: in 13 of 21 loci containing a known skeletal growth gene, that gene was closest to the associated variant. Third, at least 19 loci have multiple independently associated variants, suggesting that allelic heterogeneity is a frequent feature of polygenic traits, that comprehensive explorations of already-discovered loci should discover additional variants and that an appreciable fraction of associated loci may have been identified. Fourth, associated variants are enriched for likely functional effects on genes, being over-represented among variants that alter amino-acid structure of proteins and expression levels of nearby genes. Our data explain approximately 10% of the phenotypic variation in height, and we estimate that unidentified common variants of similar effect sizes would increase this figure to approximately 16% of phenotypic variation (approximately 20% of heritable variation). Although additional approaches are needed to dissect the genetic architecture of polygenic human traits fully, our findings indicate that GWA studies can identify large numbers of loci that implicate biologically relevant genes and pathways.
Subject headings
- MEDICIN OCH HÄLSOVETENSKAP -- Medicinska och farmaceutiska grundvetenskaper -- Medicinsk genetik (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Basic Medicine -- Medical Genetics (hsv//eng)
- MEDICIN OCH HÄLSOVETENSKAP -- Klinisk medicin -- Endokrinologi och diabetes (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Clinical Medicine -- Endocrinology and Diabetes (hsv//eng)
Keyword
- Body Height
- genetics
- Chromosomes
- Human
- Pair 3
- genetics
- Genetic Loci
- genetics
- Genetic Predisposition to Disease
- genetics
- Genome
- Human
- genetics
- Genome-Wide Association Study
- Humans
- Metabolic Networks and Pathways
- genetics
- Multifactorial Inheritance
- genetics
- Phenotype
- Polymorphism
- Single Nucleotide
- genetics
- MEDICINE
- NATURAL SCIENCES
Publication and Content Type
- ref (subject category)
- art (subject category)
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Lango Allen, Han ...
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Estrada, Karol
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Lettre, Guillaum ...
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Berndt, Sonja I
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Weedon, Michael ...
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Rivadeneira, Fer ...
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show more...
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Willer, Cristen ...
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Jackson, Anne U
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Vedantam, Sailaj ...
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Raychaudhuri, So ...
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Ferreira, Teresa
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Wood, Andrew R
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Weyant, Robert J
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Segrè, Ayellet V
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Speliotes, Eliza ...
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Wheeler, Eleanor
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Soranzo, Nicole
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Park, Ju-Hyun
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Yang, Jian
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Gudbjartsson, Da ...
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Heard-Costa, Nan ...
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Randall, Joshua ...
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Qi, Lu
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Vernon Smith, Al ...
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Mägi, Reedik
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Pastinen, Tomi
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Liang, Liming
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Heid, Iris M
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Luan, Jian'an
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Thorleifsson, Gu ...
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Winkler, Thomas ...
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Goddard, Michael ...
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Sin Lo, Ken
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Workalemahu, Tse ...
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Zillikens, M Car ...
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Feitosa, Mary F
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Esko, Tõnu
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Johnson, Toby
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Ketkar, Shamika
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Kraft, Peter
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Mangino, Massimo
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Prokopenko, Inga
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Absher, Devin
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Albrecht, Eva
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Ernst, Florian
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Glazer, Nicole L
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Hayward, Carolin ...
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Hottenga, Jouke- ...
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Jacobs, Kevin B
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Knowles, Joshua ...
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Kutalik, Zoltan
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Monda, Keri L
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Steinthorsdottir ...
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Tyrer, Jonathan ...
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Xu, Jianfeng
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Hua Zhao, Jing
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Nyholt, Dale R
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Pellikka, Niina
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Perola, Markus
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Perry, John R B
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Surakka, Ida
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Tammesoo, Mari-L ...
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Altmaier, Elizab ...
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Amin, Najaf
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Aspelund, Thor
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Bhangale, Tushar
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Boucher, Gabriel ...
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Chasman, Daniel ...
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Chen, Constance
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Coin, Lachlan
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Cooper, Matthew ...
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Dixon, Anna L
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Gibson, Quince
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Grundberg, Elin
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Hao, Ke
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Juhani Junttila, ...
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Kaplan, Lee M
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Kettunen, Johann ...
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König, Inke R
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Lawrence, Robert ...
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Levinson, Dougla ...
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Lorentzon, Matti ...
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McKnight, Barbar ...
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Morris, Andrew P
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Muller, Martina
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Suh Ngwa, Julius
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Purcell, Shaun
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Rafelt, Suzanne
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Salem, Rany M
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Salvi, Erika
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Sanna, Serena
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Shi, Jianxin
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Sovio, Ulla
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Thompson, John R
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Vandenput, Liesb ...
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Verlaan, Dominiq ...
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Vitart, Veroniqu ...
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White, Charles C
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De Grandi, Aless ...
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Dominiczak, Anna
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Duan, Jubao
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Elliott, Paul
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Eriksson, Johan ...
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Freimer, Nelson ...
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Geus, Eco J C
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Glorioso, Nicola
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Haiqing, Shen
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Hartikainen, Ann ...
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Havulinna, Aki S
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Hicks, Andrew A
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Hui, Jennie
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Igl, Wilmar
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Illig, Thomas
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Jula, Antti
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Kajantie, Eero
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Kilpeläinen, Tuo ...
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Kolcic, Ivana
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Koskinen, Seppo
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Kovacs, Peter
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Laitinen, Jaana
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Lokki, Marja-Lii ...
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Parker, Alex N
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Sambrook, Jennif ...
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Widen, Elisabeth
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Willemsen, Gonne ...
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Zagato, Laura
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Zgaga, Lina
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Zitting, Paavo
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Nelis, Mari
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Launer, Lenore J
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Musk, Arthur W
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Nieminen, Markku ...
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O'Donnell, Chris ...
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Ohlsson, Claes, ...
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Oostra, Ben
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Palmer, Lyle J
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Raitakari, Olli
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Ridker, Paul M
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Rivolta, Carlo
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Shuldiner, Alan ...
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Stumvoll, Michae ...
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Adrienne Cupples ...
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Erdmann, Jeanett ...
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Fox, Caroline S
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Gudnason, Vilmun ...
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Gyllensten, Ulf
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Harris, Tamara B
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Hayes, Richard B
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Jarvelin, Marjo- ...
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Mooser, Vincent
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Munroe, Patricia ...
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Ouwehand, Willem ...
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Penninx, Brenda ...
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Pramstaller, Pet ...
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Quertermous, Tho ...
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Rudan, Igor
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Samani, Nilesh J
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Spector, Timothy ...
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Völzke, Henry
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Watkins, Hugh
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Wilson, James F
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Groop, Leif
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Haritunians, Tal ...
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Hu, Frank B
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Kaplan, Robert C
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Metspalu, Andres
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North, Kari E
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Schlessinger, Da ...
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Wareham, Nichola ...
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Hunter, David J
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O'Connell, Jeffr ...
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Strachan, David ...
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Wichmann, H-Eric ...
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Borecki, Ingrid ...
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van Duijn, Corne ...
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Schadt, Eric E
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Thorsteinsdottir ...
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Peltonen, Leena
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Uitterlinden, An ...
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Visscher, Peter ...
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Chatterjee, Nila ...
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Loos, Ruth J F
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Boehnke, Michael
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McCarthy, Mark I
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Ingelsson, Erik
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Lindgren, Cecili ...
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Abecasis, Gonçal ...
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Stefansson, Kari
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Frayling, Timoth ...
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Hirschhorn, Joel ...
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- About the subject
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Basic Medicine
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and Medical Genetics
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Clinical Medicin ...
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and Endocrinology an ...
- Articles in the publication
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Nature
- By the university
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University of Gothenburg
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Lund University
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Karolinska Institutet
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Uppsala University