Shinella fusca sp. nov., isolated from domestic waste compost

A bacterium, designated strain DC-196(T), isolated from kitchen refuse compost was analysed by using a polyphasic approach. Strain DC-196(T) was characterized as a Gram-negative short rod that was catalase- and oxidase-positive, and able to grow at 10-40 degrees C, pH 6-9 and in NaCl concentrations as high as 3 %. Chemotaxonomically, C(18 : 1) was observed to be the predominant cellular fatty acid and ubiquinone 10 (Q10) was the predominant respiratory quinone. The G+C content of the genomic DNA was determined to be 66 mol%. On the basis of the genotypic, phenotypic and chemotaxonomic characteristics, strain DC-196(T) was assigned to the genus Shinella, although with distinctive features. At the time of writing, 16S rRNA gene sequence similarities of 97.6-96.8 % and the low DNA-DNA hybridization values of 38.2-32.2 % with the type strains of the three recognized Shinella species confirmed that strain DC-196(T) represents a novel species of the genus, for which the name Shinella fusca sp. nov. is proposed (type strain DC-196(T)=CCUG 55808(T)=LMG 24714(T)).

NATURVETENSKAP Biologi Mikrobiologi hsv//swe
NATURAL SCIENCES Biological Sciences Microbiology hsv//eng
NATURVETENSKAP Biologi Ekologi hsv//swe
NATURAL SCIENCES Biological Sciences Ecology hsv//eng
NATURVETENSKAP Biologi Biokemi och molekylärbiologi hsv//swe
NATURAL SCIENCES Biological Sciences Biochemistry and Molecular Biology hsv//eng
Base Composition
DNA
Bacterial
genetics
DNA
Ribosomal
genetics
Fatty Acids
metabolism
Molecular Sequence Data
Phylogeny
RNA
Ribosomal
16S
genetics
Rhizobiaceae
classification
genetics
isolation & purification
metabolism
Sewage
microbiology

Faria, Cátia (författare)
Lopes, Ana R (författare)
Svensson, Liselott AGothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för infektionssjukdomar,Institute of Biomedicine, Department of Infectious Medicine (författare)
Moore, Edward R.B.1954Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för infektionssjukdomar,Institute of Biomedicine, Department of Infectious Medicine(Swepub:gu)xmooed (författare)
Nunes, Olga C (författare)
Manaia, Célia M (författare)
Göteborgs universitetInstitutionen för biomedicin, avdelningen för infektionssjukdomar (creator_code:org_t)

Ingår i:International journal of systematic and evolutionary microbiology: Microbiology Society60:1, s. 144-1481466-50261466-5034

Av författaren/redakt...: Vaz-Moreira, Ivo ...; Faria, Cátia; Lopes, Ana R; Svensson, Liselo ...; Moore, Edward R. ...; Nunes, Olga C; visa fler...; Manaia, Célia M; visa färre...

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