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  • Lisacek, F. (author)

Databases and associated tools for glycomics and glycoproteomics

  • Article/chapterEnglish2017

Publisher, publication year, extent ...

  • 2016-10-15
  • New York :Springer,2017

Numbers

  • LIBRIS-ID:oai:gup.ub.gu.se/247584
  • https://gup.ub.gu.se/publication/247584URI
  • https://doi.org/10.1007/978-1-4939-6493-2_18DOI
  • https://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-184079URI

Supplementary language notes

  • Language:English

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  • Subject category:vet swepub-contenttype
  • Subject category:kap swepub-publicationtype

Notes

  • The access to biodatabases for glycomics and glycoproteomics has proven to be essential for current glycobiological research. This chapter presents available databases that are devoted to different aspects of glycobioinformatics. This includes oligosaccharide sequence databases, experimental databases, 3D structure databases (of both glycans and glycorelated proteins) and association of glycans with tissue, disease, and proteins. Specific search protocols are also provided using tools associated with experimental databases for converting primary glycoanalytical data to glycan structural information. In particular, researchers using glycoanalysis methods by U/HPLC (GlycoBase), MS (GlycoWorkbench, UniCarb-DB, GlycoDigest), and NMR (CASPER) will benefit from this chapter. In addition we also include information on how to utilize glycan structural information to query databases that associate glycans with proteins (UniCarbKB) and with interactions with pathogens (Sugar Bind). © Springer Science+Business Media New York 2017.

Subject headings and genre

Added entries (persons, corporate bodies, meetings, titles ...)

  • Mariethoz, J. (author)
  • Alocci, D. (author)
  • Rudd, P. M. (author)
  • Abrahams, J. L. (author)
  • Campbell, M. P. (author)
  • Packer, N. H. (author)
  • Ståhle, JonasStockholms universitet,Institutionen för organisk kemi(Swepub:su)jost5362 (author)
  • Widmalm, GöranStockholms universitet,Institutionen för organisk kemi(Swepub:su)gw (author)
  • Mullen, E. (author)
  • Adamczyk, Barbara,1985Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology(Swepub:gu)xadaba (author)
  • Rojas-Macias, Miguel A.,1979Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology(Swepub:gu)xrojmi (author)
  • Jin, ChunshengGothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology(Swepub:gu)xjinch (author)
  • Karlsson, N. G.Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology (author)
  • Stockholms universitetInstitutionen för organisk kemi (creator_code:org_t)

Related titles

  • In:High-Throughput Glycomics and Glycoproteomics. Eds: Gordan Lauc & Manfred WuhrerNew York : Springer, s. 235-2641064-374597814939649329781493964918

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