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Integrative species delimitation and biogeography of the Rhinella margaritifera species group (Amphibia, Anura, Bufonidae) suggest an intense diversification throughout Amazonia during the last 10 million years

Fouquet, Antoine (author)
Université Paul Sabatier
Ferrão, Miqueias (author)
Harvard University,Federal University of Goiás
Rodrigues, Miguel T. (author)
University of São Paulo
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Werneck, Fernanda P. (author)
National Institute of Amazonian Research
Prates, Ivan (author)
Lund University,Lunds universitet,Evolutionär ekologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Evolutionary ecology,Department of Biology,Faculty of Science
Moraes, Leandro J.C.L. (author)
University of São Paulo
Hrbek, Tomas (author)
Trinity University
Chaparro, Juan C. (author)
Museo de Historia Natural, Cusco
Lima, Albertina P. (author)
National Institute of Amazonian Research
Perez, Renata (author)
Federal University of Ceará
Pansonato, Andre (author)
Federal University of Mato Grosso do Sul
Carvalho, Vinicius T. (author)
Federal University of Amazonas (UFAM)
Almeida, Alexandre P. (author)
Federal University of Ceará
Gordo, Marcelo (author)
Federal University of Amazonas (UFAM)
Farias, Izeni P. (author)
Federal University of Amazonas (UFAM)
Milto, Konstantin D. (author)
Zoological Institute of the Russian Academy of Sciences
Roberto, Igor J. (author)
Ceará State University
Rojas, Rommel R. (author)
Universidad Nacional de la Amazonia Peruana
Ron, Santiago R. (author)
Pontifical Catholic University Of Ecuador
Guerra, Vinicius (author)
Federal University of Goiás
Recoder, Renato (author)
University of São Paulo
Camacho, Agustin (author)
University of São Paulo
Mamani, Luis (author)
University of Concepción
Rainha, Raissa N. (author)
National Institute of Amazonian Research
Avila, Robson W. (author)
Federal University of Ceará
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 (creator_code:org_t)
2024
2024
English.
In: Systematics and Biodiversity. - 1477-2000. ; 22:1
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • The accumulation of studies delimiting species in Amazonia has not only shed light on the patterns of its outstanding species richness but also allowed a better understanding of the processes of diversification within this immense region. Nevertheless, vast knowledge gaps remain even for prominent anuran species complexes, such as the Rhinella margaritifera species group. This clade of toads comprises 23 valid species-level taxa, mainly distributed in Amazonia but also in South America’s Dry Diagonal and Atlantic and trans-Andean rainforests. Species boundaries and taxonomy in this group are notoriously complex, with studies suggesting the existence of several unnamed species. Available phylogenetic information suggests an Andean-western Amazonian origin of the group with subsequent diversification within Amazonian lowlands during the last 10 Myr and secondary dispersals into other Neotropical regions. To further test this biogeographic scenario and improve knowledge on species diversity, we used an unprecedentedly large mtDNA sampling (>800 16S sequences) across the clade’s distribution and comprising all but one described species. We delimited 54 Molecular Operational Taxonomic Units, which we tested further based on patterns of variation of a nuclear locus and acoustic and morphological data. This approach confirmed the existence of at least 25 candidate species, 19 of which correspond to currently recognized taxa whereas 30 remained ‘unconfirmed’. Our results clarify the taxonomic status of some species but also suggest multiple introgression events that blur some mtDNA-based species boundaries. Lastly, to provide a temporal framework for the clade’s diversification, we generated a time-calibrated phylogenetic tree based on a mitogenomic matrix, which confirmed a Miocene (∼9 Ma) western Amazonian origin and six major clades in the group, each having initially diversified in different regions within Amazonia. Most of these clades have later dispersed throughout Amazonia during the establishment of the modern Amazonian hydrographic system, i.e., in the last 6 Myr.

Subject headings

NATURVETENSKAP  -- Biologi -- Biologisk systematik (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Biological Systematics (hsv//eng)
NATURVETENSKAP  -- Biologi -- Evolutionsbiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Evolutionary Biology (hsv//eng)

Keyword

Bioacoustics
cryptic species
DNA
morphometrics
Neotropics
phylogenetics

Publication and Content Type

art (subject category)
ref (subject category)

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