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  • Leonard, Hampton L.National Institute on Aging, United States,German Center for Neurodegenerative Diseases (DZNE), Bonn (author)

The IPDGC/GP2 Hackathon - an open science event for training in data science, genomics, and collaboration using Parkinson’s disease data

  • Article/chapterEnglish2023

Publisher, publication year, extent ...

  • 2023-03-04
  • Springer Science and Business Media LLC,2023

Numbers

  • LIBRIS-ID:oai:lup.lub.lu.se:c4346125-b4bf-44c9-a5d2-499069423686
  • https://lup.lub.lu.se/record/c4346125-b4bf-44c9-a5d2-499069423686URI
  • https://doi.org/10.1038/s41531-023-00472-6DOI

Supplementary language notes

  • Language:English
  • Summary in:English

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Classification

  • Subject category:art swepub-publicationtype
  • Subject category:ref swepub-contenttype

Notes

  • Open science and collaboration are necessary to facilitate the advancement of Parkinson’s disease (PD) research. Hackathons are collaborative events that bring together people with different skill sets and backgrounds to generate resources and creative solutions to problems. These events can be used as training and networking opportunities, thus we coordinated a virtual 3-day hackathon event, during which 49 early-career scientists from 12 countries built tools and pipelines with a focus on PD. Resources were created with the goal of helping scientists accelerate their own research by having access to the necessary code and tools. Each team was allocated one of nine different projects, each with a different goal. These included developing post-genome-wide association studies (GWAS) analysis pipelines, downstream analysis of genetic variation pipelines, and various visualization tools. Hackathons are a valuable approach to inspire creative thinking, supplement training in data science, and foster collaborative scientific relationships, which are foundational practices for early-career researchers. The resources generated can be used to accelerate research on the genetics of PD.

Subject headings and genre

Added entries (persons, corporate bodies, meetings, titles ...)

  • Murtadha, RuqayaNational Institute on Aging, United States (author)
  • Martinez-Carrasco, AlejandroUniversity College London (author)
  • Jama, AlinaUniversity College London (author)
  • Müller-Nedebock, Amica CordaSouth African Medical Research Council (author)
  • Gil-Martinez, Ana LuisaUniversity College London,UCL Institute of Child Health (author)
  • Illarionova, AnastasiaGerman Center for Neurodegenerative Diseases (DZNE), Bonn (author)
  • Moore, AnniNational Institute on Aging, United States (author)
  • Bustos, Bernabe I.Northwestern University Feinberg School of Medicine (author)
  • Jadhav, BharatiHess Corporation (author)
  • Huxford, BrookQueen Mary University (author)
  • Storm, CatherineUniversity College London (author)
  • Towns, ClodaghUniversity College London (author)
  • Vitale, DanData Tecnica International,National Institute on Aging, United States (author)
  • Chetty, DevinaUniversity College London (author)
  • Yu, EricMcGill University,Montreal Neurological Institute & Hospital (author)
  • Grenn, Francis P.National Institute on Aging, United States (author)
  • Salazar, GabrielaINNCOSYS (author)
  • Rateau, GeoffreyPitié-Salpêtrière University Hospital (author)
  • Iwaki, HirotakaNational Institute on Aging, United States,Data Tecnica International (author)
  • Elsayed, InasUniversity of Gezira (author)
  • Foote, Isabelle FrancescaQueen Mary University,Hess Corporation (author)
  • Jansen van Rensburg, ZunéUniversity College London (author)
  • Kim, Jonggeol JeffNational Institute on Aging, United States,Hess Corporation (author)
  • Yuan, JieHarvard Medical School (author)
  • Lake, JulieNational Institute on Aging, United States (author)
  • Brolin, KajsaLund University,Lunds universitet,Translationell Neurogenetik,Forskargrupper vid Lunds universitet,Translational Neurogenetics,Lund University Research Groups(Swepub:lu)ka1517br (author)
  • Senkevich, KonstantinMcGill University (author)
  • Wu, LesleyUniversity College London (author)
  • Tan, Manuela M.X.Oslo university hospital,University College London (author)
  • Makarious, Mary B.University College London,National Institute on Aging, United States (author)
  • Ta, MichaelNational Institute on Aging, United States (author)
  • Pillay, Nikita SimoneUniversity of the Western Cape (author)
  • Betancor, Oswaldo LorenzoVA Puget Sound Health Care System,Washington University School of Medicine (author)
  • Reyes-Pérez, Paula R.National Autonomous University of Mexico (author)
  • Alvarez Jerez, PilarNational Institute on Aging, United States (author)
  • Saini, PrabhjyotQueen Mary University,McGill University (author)
  • al-Ouran, RamiBaylor College of Medicine (author)
  • Sivakumar, RamiyaUniversity of Southern California (author)
  • Real, RaquelUniversity College London (author)
  • Reynolds, Regina H.University College London,South African Medical Research Council (author)
  • Hu, RuifnegHarvard Medical School (author)
  • Abrahams, ShameemahUniversity College London (author)
  • Rao, Shilpa C.Case Western Reserve University,Cleveland Clinic Foundation (author)
  • Antar, TarekNational Institute on Aging, United States (author)
  • Leal, Thiago PeixotoCleveland Clinic Foundation (author)
  • Iankova, VassilenaUniversity Hospital Munich (author)
  • Scotton, William J.South African Medical Research Council (author)
  • Song, YeajinNational Institute on Aging, United States (author)
  • National Institute on Aging, United StatesGerman Center for Neurodegenerative Diseases (DZNE), Bonn (creator_code:org_t)
  • International Parkinson's Disease Genomics Consortium (IPDGC)
  • The Global Parkinson's Genetic Program (GP2)

Related titles

  • In:npj Parkinson's Disease: Springer Science and Business Media LLC9:12373-8057

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