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Genomic analysis of...
Genomic analysis of european drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses
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- Kapun, Martin (author)
- University of Fribourg,University of Lausanne
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- Barron, Maite G. (author)
- Pompeu Fabra University
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- Staubach, Fabian (author)
- Albert-Ludwigs University Freiburg
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- Obbard, Darren J. (author)
- University of Edinburgh
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- Axel, R. (author)
- University of St Andrews
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- Vieira, Jorge (author)
- Institute for Molecular and Cell Biology,University of Porto
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- Goubert, Clement (author)
- Cornell University,Claude Bernard University Lyon 1
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- Rota-Stabelli, Omar (author)
- Edmund Mach Foundation
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- Kankare, Maaria (author)
- University of Jyväskylä
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- Bogaerts-Marquez, Maria (author)
- Pompeu Fabra University
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- Haudry, Annabelle (author)
- Claude Bernard University Lyon 1
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- Waidele, Lena (author)
- Albert-Ludwigs University Freiburg
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- Kozeretska, Iryna (author)
- Taras Shevchenko National University of Kyiv
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Pasyukova, Elena G. (author)
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- Loeschcke, Volker (author)
- Aarhus University
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- Pascual, Marta (author)
- University of Barcelona
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- Vieira, Cristina P. (author)
- University of Porto,Institute for Molecular and Cell Biology
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- Serga, Svitlana (author)
- Taras Shevchenko National University of Kyiv
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- Montchamp-Moreau, Catherine (author)
- University of Paris-Saclay
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- Abbott, Jessica (author)
- Lund University,Lunds universitet,Evolutionär ekologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Evolutionary ecology,Department of Biology,Faculty of Science,European Drosophila Population Genomics Consortium (DrosEU)
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- Gibert, Patricia (author)
- Claude Bernard University Lyon 1
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- Porcelli, Damiano (author)
- University of Sheffield
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- Posnien, Nico (author)
- University of Göttingen
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- Sanchez-Gracia, Alejandro (author)
- University of Barcelona
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- Grath, Sonja (author)
- World Orthopaedic Concern
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- Sucena, Elio (author)
- Gulbenkian Institute Of Science (IGC),NOVA University Lisbon
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- Bergland, Alan O. (author)
- University of Virginia
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- Guerreiro, Maria Pilar Garcia (author)
- Autonomous University of Barcelona
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- Onder, Banu Sebnem (author)
- Hacettepe University
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- Argyridou, Eliza (author)
- World Orthopaedic Concern
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- Guio, Lain (author)
- Pompeu Fabra University
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- Schou, Mads Fristrup (author)
- Lund University,Lunds universitet,MEMEG,Biologiska institutionen,Naturvetenskapliga fakulteten,Molekylär ekologi och evolution,Forskargrupper vid Lunds universitet,Department of Biology,Faculty of Science,Molecular Ecology and Evolution Lab,Lund University Research Groups,Aarhus University
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- Deplancke, Bart (author)
- Swiss Federal Institute of Technology
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- Vieira, Cristina (author)
- Claude Bernard University Lyon 1
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- Ritchie, Michael G. (author)
- University of St Andrews
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- Zwaan, Bas J. (author)
- Wageningen University
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- Tauber, Eran (author)
- University of Haifa
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- Orengo, Dorcas J. (author)
- University of Barcelona
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- Puerma, Eva (author)
- University of Barcelona
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- Aguade, Montserrat (author)
- University of Barcelona
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- Schmidt, Paul (author)
- University of Pennsylvania
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- Parsch, John (author)
- World Orthopaedic Concern
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- Betancourt, Andrea J. (author)
- University of Liverpool
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- Flatt, Thomas (author)
- University of Lausanne,University of Fribourg
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- Gonzalez, Josefa (author)
- Pompeu Fabra University
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(creator_code:org_t)
- 2020-05-15
- 2020
- English 18 s.
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In: Molecular biology and evolution. - : Oxford University Press (OUP). - 0737-4038 .- 1537-1719. ; 37:9, s. 2661-2678
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http://dx.doi.org/10... (free)
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https://academic.oup...
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https://doi.org/10.1...
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Abstract
Subject headings
Close
- Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, identify candidate genes for local climate adaptation, and document clines in chromosomal inversion and transposable element frequencies. We also characterize variation among populations in the composition of the fly microbiome, and identify five new DNA viruses in our samples.
Subject headings
- NATURVETENSKAP -- Biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences (hsv//eng)
Keyword
- Adaptation
- Clines
- Demography
- Population genomics
- Selection
- SNPs
- Structural variants
Publication and Content Type
- art (subject category)
- ref (subject category)
Find in a library
To the university's database
- By the author/editor
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Kapun, Martin
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Barron, Maite G.
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Staubach, Fabian
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Obbard, Darren J ...
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Axel, R.
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Vieira, Jorge
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show more...
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Goubert, Clement
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Rota-Stabelli, O ...
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Kankare, Maaria
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Bogaerts-Marquez ...
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Haudry, Annabell ...
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Waidele, Lena
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Kozeretska, Iryn ...
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Pasyukova, Elena ...
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Loeschcke, Volke ...
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Pascual, Marta
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Vieira, Cristina ...
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Serga, Svitlana
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Montchamp-Moreau ...
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Abbott, Jessica
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Gibert, Patricia
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Porcelli, Damian ...
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Posnien, Nico
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Sanchez-Gracia, ...
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Grath, Sonja
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Sucena, Elio
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Bergland, Alan O ...
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Guerreiro, Maria ...
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Onder, Banu Sebn ...
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Argyridou, Eliza
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Guio, Lain
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Schou, Mads Fris ...
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Deplancke, Bart
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Vieira, Cristina
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Ritchie, Michael ...
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Zwaan, Bas J.
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Tauber, Eran
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Orengo, Dorcas J ...
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Puerma, Eva
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Aguade, Montserr ...
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Schmidt, Paul
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Parsch, John
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Betancourt, Andr ...
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Flatt, Thomas
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Gonzalez, Josefa
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
- Articles in the publication
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Molecular biolog ...
- By the university
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Lund University