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Leveraging high-resolution omics data for predicting responses and adverse events to immune checkpoint inhibitors

Limeta, Angelo, 1996 (author)
Chalmers tekniska högskola,Chalmers University of Technology
Gatto, Francesco, 1987 (author)
Karolinska Institutet,Chalmers tekniska högskola,Chalmers University of Technology
Herrgard, M. J. (author)
BioInnovation Institute (BII)
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Ji, Boyang, 1983 (author)
BioInnovation Institute (BII)
Nielsen, Jens B, 1962 (author)
Chalmers tekniska högskola,Chalmers University of Technology,BioInnovation Institute (BII)
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 (creator_code:org_t)
2023
2023
English.
In: Computational and Structural Biotechnology Journal. - 2001-0370. ; 21, s. 3912-3919
  • Research review (peer-reviewed)
Abstract Subject headings
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  • A long-standing goal of personalized and precision medicine is to enable accurate prediction of the outcomes of a given treatment regimen for patients harboring a disease. Currently, many clinical trials fail to meet their endpoints due to underlying factors in the patient population that contribute to either poor responses to the drug of interest or to treatment-related adverse events. Identifying these factors beforehand and correcting for them can lead to an increased success of clinical trials. Comprehensive and large-scale data gathering efforts in biomedicine by omics profiling of the healthy and diseased individuals has led to a treasure-trove of host, disease and environmental factors that contribute to the effectiveness of drugs aiming to treat disease. With increasing omics data, artificial intelligence allows an in-depth analysis of big data and offers a wide range of applications for real-world clinical use, including improved patient selection and identification of actionable targets for companion therapeutics for improved translatability across more patients. As a blueprint for complex drug-disease-host interactions, we here discuss the challenges of utilizing omics data for predicting responses and adverse events in cancer immunotherapy with immune checkpoint inhibitors (ICIs). The omics-based methodologies for improving patient outcomes as in the ICI case have also been applied across a wide-range of complex disease settings, exemplifying the use of omics for in-depth disease profiling and clinical use.

Subject headings

MEDICIN OCH HÄLSOVETENSKAP  -- Klinisk medicin -- Cancer och onkologi (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Clinical Medicine -- Cancer and Oncology (hsv//eng)

Keyword

Immune related adverse events
Omics
Predictive models
Immune-checkpoint inhibitors
Biomarkers

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