The Atlantic salmon genome provides insights into rediploidization

↓ Direkt till sidans innehåll
↓ Direkt till sidans sekundära innehåll (sidomenyn)

Sökning: WFRF:(Di Genova Alex) > The Atlantic salmon...

1 av 1
Föregående post
Nästa post
Till träfflistan

LIBRIS Formathandbok (Information om MARC21)

Fältnamn	Indikatorer	Metadata
000		04358naa a2200841 4500
001		oai:DiVA.org:umu-121444
003		SwePub
008		160602s2016 \| \|\|\|\|\|\|\|\|\|\|\|000 \|\|eng\|
024	7	a https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-1214442 URI
024	7	a https://doi.org/10.1038/nature171642 DOI
040		a (SwePub)umu
041		a engb eng
042		9 SwePub
072	7	a ref2 swepub-contenttype
072	7	a art2 swepub-publicationtype
100	1	a Lien, Sigbjorn4 aut
245	1 0	a The Atlantic salmon genome provides insights into rediploidization
264		c 2016-04-18
264	1	b Nature Publishing Group,c 2016
338		a electronic2 rdacarrier
520		a The whole-genome duplication 80 million years ago of the common ancestor of salmonids (salmonid-specific fourth vertebrate whole-genome duplication, Ss4R) provides unique opportunities to learn about the evolutionary fate of a duplicated vertebrate genome in 70 extant lineages. Here we present a high-quality genome assembly for Atlantic salmon (Salmo salar), and show that large genomic reorganizations, coinciding with bursts of transposon-mediated repeat expansions, were crucial for the post-Ss4R rediploidization process. Comparisons of duplicate gene expression patterns across a wide range of tissues with orthologous genes from a pre-Ss4R outgroup unexpectedly demonstrate far more instances of neofunctionalization than subfunctionalization. Surprisingly, we find that genes that were retained as duplicates after the teleost-specific whole-genome duplication 320 million years ago were not more likely to be retained after the Ss4R, and that the duplicate retention was not influenced to a great extent by the nature of the predicted protein interactions of the gene products. Finally, we demonstrate that the Atlantic salmon assembly can serve as a reference sequence for the study of other salmonids for a range of purposes.
650	7	a NATURVETENSKAPx Biologi0 (SwePub)1062 hsv//swe
650	7	a NATURAL SCIENCESx Biological Sciences0 (SwePub)1062 hsv//eng
700	1	a Koop, Ben F.4 aut
700	1	a Sandve, Simen R.4 aut
700	1	a Miller, Jason R.4 aut
700	1	a Kent, Matthew P.4 aut
700	1	a Nome, Torfinn4 aut
700	1	a Hvidsten, Torgeir R.u Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)4 aut0 (Swepub:umu)tokv0002
700	1	a Leong, Jong S.4 aut
700	1	a Minkley, David R.4 aut
700	1	a Zimin, Aleksey4 aut
700	1	a Grammes, Fabian4 aut
700	1	a Grove, Harald4 aut
700	1	a Gjuvsland, Arne4 aut
700	1	a Walenz, Brian4 aut
700	1	a Hermansen, Russell A.4 aut
700	1	a von Schalburg, Kris4 aut
700	1	a Rondeau, Eric B.4 aut
700	1	a Di Genova, Alex4 aut
700	1	a Samy, Jeevan K. A.4 aut
700	1	a Vik, Jon Olav4 aut
700	1	a Vigeland, Magnus D.4 aut
700	1	a Caler, Lis4 aut
700	1	a Grimholt, Unni4 aut
700	1	a Jentoft, Sissel4 aut
700	1	a Vage, Dag Inge4 aut
700	1	a de Jong, Pieter4 aut
700	1	a Moen, Thomas4 aut
700	1	a Baranski, Matthew4 aut
700	1	a Palti, Yniv4 aut
700	1	a Smith, Douglas R.4 aut
700	1	a Yorke, James A.4 aut
700	1	a Nederbragt, Alexander J.4 aut
700	1	a Tooming-Klunderud, Ave4 aut
700	1	a Jakobsen, Kjetill S.4 aut
700	1	a Jiang, Xuanting4 aut
700	1	a Fan, Dingding4 aut
700	1	a Liberles, David A.4 aut
700	1	a Vidal, Rodrigo4 aut
700	1	a Iturra, Patricia4 aut
700	1	a Jones, Steven J. M.4 aut
700	1	a Jonassen, Inge4 aut
700	1	a Maass, Alejandro4 aut
700	1	a Omholt, Stig W.4 aut
700	1	a Davidson, William S.4 aut
710	2	a Umeå universitetb Institutionen för fysiologisk botanik4 org
773	0	t Natured : Nature Publishing Groupg 533:7602, s. 200-205q 533:7602<200-205x 0028-0836x 1476-4687
856	4	u https://doi.org/10.1038/nature17164y Fulltext
856	4	u https://umu.diva-portal.org/smash/get/diva2:941322/FULLTEXT01.pdfx primaryx Raw objecty fulltext:print
856	4	u https://www.nature.com/articles/nature17164.pdf
856	4 8	u https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-121444
856	4 8	u https://doi.org/10.1038/nature17164

Hitta via bibliotek

Nature (Sök värdpublikationen i LIBRIS)

Till lärosätets databas

1 av 1
Föregående post
Nästa post
Till träfflistan

Hitta mer i SwePub

Av författaren/redakt...: Lien, Sigbjorn; Koop, Ben F.; Sandve, Simen R.; Miller, Jason R.; Kent, Matthew P.; Nome, Torfinn; visa fler...; Hvidsten, Torgei ...; Leong, Jong S.; Minkley, David R ...; Zimin, Aleksey; Grammes, Fabian; Grove, Harald; Gjuvsland, Arne; Walenz, Brian; Hermansen, Russe ...; von Schalburg, K ...; Rondeau, Eric B.; Di Genova, Alex; Samy, Jeevan K. ...; Vik, Jon Olav; Vigeland, Magnus ...; Caler, Lis; Grimholt, Unni; Jentoft, Sissel; Vage, Dag Inge; de Jong, Pieter; Moen, Thomas; Baranski, Matthe ...; Palti, Yniv; Smith, Douglas R ...; Yorke, James A.; Nederbragt, Alex ...; Tooming-Klunderu ...; Jakobsen, Kjetil ...; Jiang, Xuanting; Fan, Dingding; Liberles, David ...; Vidal, Rodrigo; Iturra, Patricia; Jones, Steven J. ...; Jonassen, Inge; Maass, Alejandro; Omholt, Stig W.; Davidson, Willia ...; visa färre...

Om ämnet

NATURVETENSKAP: NATURVETENSKAP; och Biologi

Artiklar i publikationen: Nature

Av lärosätet: Umeå universitet

Sök utanför SwePub

Sök vidare i:: Google; Google Book Search; Google Scholar

Kungliga biblioteket hanterar dina personuppgifter i enlighet med EU:s dataskyddsförordning (2018), GDPR. Läs mer om hur det funkar här.
Så här hanterar KB dina uppgifter vid användning av denna tjänst.

LIBRIS.kb.se