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| Fältnamn | Indikatorer | Metadata |
|---|---|---|
| 000 | 02679naa a2200349 4500 | |
| 001 | oai:lup.lub.lu.se:9f217021-8436-4ff7-aeb0-737bdf576a33 | |
| 003 | SwePub | |
| 008 | 160401s2009 | |||||||||||000 ||eng| | |
| 024 | 7 | a https://lup.lub.lu.se/record/14050192 URI |
| 024 | 7 | a https://doi.org/10.1093/bioinformatics/btp0512 DOI |
| 040 | a (SwePub)lu | |
| 041 | a engb eng | |
| 042 | 9 SwePub | |
| 072 | 7 | a art2 swepub-publicationtype |
| 072 | 7 | a ref2 swepub-contenttype |
| 100 | 1 | a Pommier, Thomas4 aut |
| 245 | 1 0 | a RAMI: a tool for identification and characterization of phylogenetic clusters in microbial communities |
| 264 | c 2009-02-17 | |
| 264 | 1 | b Oxford University Press (OUP),c 2009 |
| 520 | a Motivation: The most common approach to estimate microbial diversity is based on the analysis of DNA sequences of specific target genes including ribosomal genes. Commonly, the sequences are grouped into operational taxonomic units based on genetic distance (sequence similarity) instead of genetic change (patristic distance). This method may fail to adequately identify clusters of evolutionary related sequences and it provides no information on the phylogenetic structure of the community. An ease-of-use web application for this purpose has been missing. Results: We have developed RAMI, which clusters related nodes in a phylogenetic tree based on the patristic distance. RAMI also produces indices of cluster properties and other indices used in population and community studies on-the-fly. | |
| 650 | 7 | a NATURVETENSKAPx Biologix Bioinformatik och systembiologi0 (SwePub)106102 hsv//swe |
| 650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Bioinformatics and Systems Biology0 (SwePub)106102 hsv//eng |
| 700 | 1 | a Canback, Bjorn4 aut |
| 700 | 1 | a Lundberg, Peru Lund University,Lunds universitet,Evolutionär ekologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Evolutionary ecology,Department of Biology,Faculty of Science4 aut0 (Swepub:lu)teor-plu |
| 700 | 1 | a Hagstrom, Ake4 aut |
| 700 | 1 | a Tunlid, Andersu Lund University,Lunds universitet,MEMEG,Biologiska institutionen,Naturvetenskapliga fakulteten,Department of Biology,Faculty of Science4 aut0 (Swepub:lu)mbek-atu |
| 710 | 2 | a Evolutionär ekologib Biologiska institutionen4 org |
| 773 | 0 | t Bioinformaticsd : Oxford University Press (OUP)g 25:6, s. 736-742q 25:6<736-742x 1367-4803x 1460-2059 |
| 856 | 4 | u http://dx.doi.org/10.1093/bioinformatics/btp051y FULLTEXT |
| 856 | 4 | u https://academic.oup.com/bioinformatics/article-pdf/25/6/736/16892361/btp051.pdf |
| 856 | 4 8 | u https://lup.lub.lu.se/record/1405019 |
| 856 | 4 8 | u https://doi.org/10.1093/bioinformatics/btp051 |
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