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Segmentation of gli...
Segmentation of glioblastomas in early post-operative multi-modal MRI with deep neural networks.
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Helland, Ragnhild Holden (author)
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Ferles, Alexandros (author)
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Pedersen, André (author)
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Kommers, Ivar (author)
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Ardon, Hilko (author)
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Barkhof, Frederik (author)
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Bello, Lorenzo (author)
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Berger, Mitchel S (author)
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- Dunås, Tora, 1988 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för neurovetenskap och fysiologi, sektionen för klinisk neurovetenskap,Institute of Neuroscience and Physiology, Department of Clinical Neuroscience
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Nibali, Marco Conti (author)
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Furtner, Julia (author)
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Hervey-Jumper, Shawn (author)
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Idema, Albert J S (author)
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Kiesel, Barbara (author)
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Tewari, Rishi Nandoe (author)
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Mandonnet, Emmanuel (author)
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Müller, Domenique M J (author)
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Robe, Pierre A (author)
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Rossi, Marco (author)
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Sagberg, Lisa M (author)
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Sciortino, Tommaso (author)
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Aalders, Tom (author)
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Wagemakers, Michiel (author)
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Widhalm, Georg (author)
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Witte, Marnix G (author)
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Zwinderman, Aeilko H (author)
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Majewska, Paulina L (author)
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- Jakola, Asgeir Store (author)
- Gothenburg University,Göteborgs universitet,Institutionen för neurovetenskap och fysiologi, sektionen för klinisk neurovetenskap,Institute of Neuroscience and Physiology, Department of Clinical Neuroscience
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Solheim, Ole (author)
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Hamer, Philip C De Witt (author)
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Reinertsen, Ingerid (author)
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Eijgelaar, Roelant S (author)
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Bouget, David (author)
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(creator_code:org_t)
- 2023
- 2023
- English.
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In: Scientific reports. - 2045-2322. ; 13:1
- Related links:
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https://gup.ub.gu.se...
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https://doi.org/10.1...
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Abstract
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- Extent of resection after surgery is one of the main prognostic factors for patients diagnosed with glioblastoma. To achieve this, accurate segmentation and classification of residual tumor from post-operative MR images is essential. The current standard method for estimating it is subject to high inter- and intra-rater variability, and an automated method for segmentation of residual tumor in early post-operative MRI could lead to a more accurate estimation of extent of resection. In this study, two state-of-the-art neural network architectures for pre-operative segmentation were trained for the task. The models were extensively validated on a multicenter dataset with nearly 1000 patients, from 12 hospitals in Europe and the United States. The best performance achieved was a 61% Dice score, and the best classification performance was about 80% balanced accuracy, with a demonstrated ability to generalize across hospitals. In addition, the segmentation performance of the best models was on par with human expert raters. The predicted segmentations can be used to accurately classify the patients into those with residual tumor, and those with gross total resection.
Subject headings
- MEDICIN OCH HÄLSOVETENSKAP -- Klinisk medicin -- Kirurgi (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Clinical Medicine -- Surgery (hsv//eng)
- MEDICIN OCH HÄLSOVETENSKAP -- Klinisk medicin -- Radiologi och bildbehandling (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Clinical Medicine -- Radiology, Nuclear Medicine and Medical Imaging (hsv//eng)
- MEDICIN OCH HÄLSOVETENSKAP -- Klinisk medicin -- Neurologi (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Clinical Medicine -- Neurology (hsv//eng)
- MEDICIN OCH HÄLSOVETENSKAP -- Klinisk medicin -- Cancer och onkologi (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Clinical Medicine -- Cancer and Oncology (hsv//eng)
Keyword
- Humans
- Europe
- Glioblastoma
- diagnostic imaging
- surgery
- pathology
- Image Processing
- Computer-Assisted
- methods
- Magnetic Resonance Imaging
- methods
- Neoplasm
- Residual
- diagnostic imaging
- Neural Networks
- Computer
- Multicenter Studies as Topic
- Datasets as Topic
Publication and Content Type
- ref (subject category)
- art (subject category)
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Helland, Ragnhil ...
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Ferles, Alexandr ...
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Pedersen, André
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Kommers, Ivar
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Ardon, Hilko
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Barkhof, Frederi ...
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show more...
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Bello, Lorenzo
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Berger, Mitchel ...
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Dunås, Tora, 198 ...
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Nibali, Marco Co ...
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Furtner, Julia
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Hervey-Jumper, S ...
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Idema, Albert J ...
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Kiesel, Barbara
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Tewari, Rishi Na ...
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Mandonnet, Emman ...
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Müller, Domeniqu ...
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Robe, Pierre A
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Rossi, Marco
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Sagberg, Lisa M
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Sciortino, Tomma ...
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Aalders, Tom
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Wagemakers, Mich ...
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Widhalm, Georg
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Witte, Marnix G
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Zwinderman, Aeil ...
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Majewska, Paulin ...
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Jakola, Asgeir S ...
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Solheim, Ole
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Hamer, Philip C ...
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Reinertsen, Inge ...
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Eijgelaar, Roela ...
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Bouget, David
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MEDICAL AND HEAL ...
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MEDICAL AND HEAL ...
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University of Gothenburg