Sökning: WFRF:(Tkachenko Valery) > The ChEMBL database...
Fältnamn | Indikatorer | Metadata |
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000 | 03406naa a2200457 4500 | |
001 | oai:DiVA.org:uu-202125 | |
003 | SwePub | |
008 | 130619s2013 | |||||||||||000 ||eng| | |
024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-2021252 URI |
024 | 7 | a https://doi.org/10.1186/1758-2946-5-232 DOI |
040 | a (SwePub)uu | |
041 | a engb eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
072 | 7 | a art2 swepub-publicationtype |
100 | 1 | a Willighagen, Egon L4 aut |
245 | 1 0 | a The ChEMBL database as linked open data |
264 | c 2013-05-08 | |
264 | 1 | b Springer Science and Business Media LLC,c 2013 |
338 | a electronic2 rdacarrier | |
520 | a Background: Making data available as Linked Data using Resource Description Framework (RDF) promotes integration with other web resources. RDF documents can natively link to related data, and others can link back using Uniform Resource Identifiers (URIs). RDF makes thedata machine-readable and uses extensible vocabularies for additional information, making it easier to scale up inference and data analysis. Results: This paper describes recent developments in an ongoing project converting data from the ChEMBL database into RDF triples. Relative to earlier versions, this updated version of ChEMBL-RDF uses recently introduced ontologies, including CHEMINF and CiTO; exposes more information from the database; and is now available as dereferencable,linked data. To demonstrate these new features, we present novel use cases showing further integration with other web resources, including Bio2RDF, Chem2Bio2RDF, and ChemSpider, and showing the use of standard ontologies for querying. Conclusions: We have illustrated the advantages of using open standards and ontologies to link the ChEMBL database to other databases. Using those links and the knowledge encoded in standards and ontologies, theChEMBL-RDF resource creates a foundation for integrated semantic web cheminformatics applications, such as the presented decision support. | |
650 | 7 | a NATURVETENSKAPx Data- och informationsvetenskapx Bioinformatik0 (SwePub)102032 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Computer and Information Sciencesx Bioinformatics0 (SwePub)102032 hsv//eng |
653 | a ChEMBL; Bioactivity; Semantic web; Resource Description Framework; Linked Data | |
653 | a Bioinformatik | |
653 | a Bioinformatics | |
700 | 1 | a Waagmeester, Andra4 aut |
700 | 1 | a Spjuth, Ola,d 1977-u Uppsala universitet,Institutionen för farmaceutisk biovetenskap4 aut0 (Swepub:uu)olspj499 |
700 | 1 | a Ansell, Peter4 aut |
700 | 1 | a Williams, Antony J4 aut |
700 | 1 | a Tkachenko, Valery4 aut |
700 | 1 | a Hastings, Janna4 aut |
700 | 1 | a Chen, Bin4 aut |
700 | 1 | a Wild, David J4 aut |
710 | 2 | a Uppsala universitetb Institutionen för farmaceutisk biovetenskap4 org |
773 | 0 | t Journal of Cheminformaticsd : Springer Science and Business Media LLCg 5:1, s. 23-q 5:1<23-x 1758-2946 |
856 | 4 | u https://doi.org/10.1186/1758-2946-5-23y Fulltext |
856 | 4 | u https://uu.diva-portal.org/smash/get/diva2:630992/FULLTEXT01.pdfx primaryx Raw objecty fulltext:print |
856 | 4 | u https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-5-23 |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-202125 |
856 | 4 8 | u https://doi.org/10.1186/1758-2946-5-23 |
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