Search: WFRF:(Xu Ximing) > (2020-2023) > Genome architecture...
Fältnamn | Indikatorer | Metadata |
---|---|---|
000 | 03150naa a2200445 4500 | |
001 | oai:gup.ub.gu.se/327479 | |
003 | SwePub | |
008 | 240528s2023 | |||||||||||000 ||eng| | |
024 | 7 | a https://gup.ub.gu.se/publication/3274792 URI |
024 | 7 | a https://doi.org/10.1016/j.xinn.2023.1004642 DOI |
040 | a (SwePub)gu | |
041 | a eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
072 | 7 | a art2 swepub-publicationtype |
100 | 1 | a Li, Ao4 aut |
245 | 1 0 | a Genome architecture and selective signals compensatorily shape plastic response to a new environment |
264 | 1 | c 2023 |
520 | a Transcriptional plasticity interacts with natural selection in complex ways and is crucial for the survival of species under rapid climate change. How 3D genome architecture affects transcriptional plasticity and its interaction with genetic adaptation are unclear. We transplanted estuarine oysters to a new environment and found that genes located in active chromatin regions exhibited greater transcriptional plasticity, and changes in these regions were negatively correlated with selective signals. This indicates a trade-off be- tween 3D active regions and selective signals in shaping plastic responses to a new environment. Specifically, a mutation, lincRNA, and changes in the accessibility of a distal enhancer potentially affect its interaction with the ManIIa gene, which regulates the muscle function and survival of oysters. Our findings reveal that 3D genome architecture compensates for the role of genetic adaptation in environmental response to new environments and provide insights into synergetic genetic and epigenetic interactions critical for fitness-related trait and survival in a model marine species. | |
650 | 7 | a NATURVETENSKAPx Biologix Bioinformatik och systembiologi0 (SwePub)106102 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Bioinformatics and Systems Biology0 (SwePub)106102 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Cellbiologi0 (SwePub)106042 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Cell Biology0 (SwePub)106042 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Genetik0 (SwePub)106092 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Genetics0 (SwePub)106092 hsv//eng |
653 | a Oyster; Chromatin structure; Local adaptation; Plasticity | |
700 | 1 | a Zhao, Mingjie4 aut |
700 | 1 | a Wang, Chaogang4 aut |
700 | 1 | a Zhang, Kexin4 aut |
700 | 1 | a Zhang, Xu4 aut |
700 | 1 | a De Wit, Pierre,d 1978u Gothenburg University,Göteborgs universitet,Institutionen för marina vetenskaper, Tjärnö marinlaboratoriet,Department of marine sciences, Tjärnö Marine Laboratory4 aut0 (Swepub:gu)xdewpi |
700 | 1 | a Wang, Wei4 aut |
700 | 1 | a Gao, Juntao4 aut |
700 | 1 | a Guo, Ximing4 aut |
700 | 1 | a Zhang, Guofan4 aut |
700 | 1 | a Li, Li4 aut |
710 | 2 | a Göteborgs universitetb Institutionen för marina vetenskaper, Tjärnö marinlaboratoriet4 org |
773 | 0 | t The Innovationg 4:4q 4:4x 2666-6758 |
856 | 4 8 | u https://gup.ub.gu.se/publication/327479 |
856 | 4 8 | u https://doi.org/10.1016/j.xinn.2023.100464 |
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