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The coelomic epithelium transcriptome from a clonal sea star, Coscinasterias muricata
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- Gabre, Jonatan L., 1988 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för kemi och molekylärbiologi,Department of Chemistry and Molecular Biology
- Martinez, P. (author)
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- Nilsson Sköld, Helen, 1970 (author)
- Gothenburg University,Göteborgs universitet,Sven Lovén centrum för marina vetenskaper,The Sven Lovén Centre for Marine Sciences
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- Abril, J. F. (author)
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- (creator_code:org_t)
- Elsevier BV, 2015
- 2015
- English.
- In: Marine Genomics. - : Elsevier BV. - 1874-7787. ; 24, s. 245-248
- Journal article (peer-reviewed)
Abstract
Subject headings
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- Coscinasterias is a cosmopolitan genus of large asteroid sea stars with the ability of somatic fission as a clonal reproductive strategy. During fission, the animals tear themselves apart across their central disc, where the lost body parts are regenerated afterwards. Here, we have sequenced and subsequently analysed the transcriptome of the coelomic epithelium of a clonal Coscinasterias muricata specimen from New Zealand. Out of the total 389,768 raw reads, 11,344 contigs were assembled and grouped into functions. Raw read and assembled contig sequences are available at NCBI (BioSample: SAMN03371637), while the annotated assembly can be accessed through the project transcriptome browser (compgen.bio.ub.edu/gbrowse/starfish_transcriptome/). Our data is valuable for future detailed exploration of the coelomic epithelium functions as well as for a better understanding of sea star physiology. (c) 2015 Elsevier B.V. All rights reserved.
Subject headings
- NATURVETENSKAP -- Biologi -- Ekologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Ecology (hsv//eng)
Keyword
- Pyrosequencing
- RNA-Seq
- Transcriptome
- Echinoderm
- Sea star
- Stem cells
- Regeneration
- Clonal
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- ref (subject category)
- art (subject category)
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- Marine Genomics
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- University of Gothenburg
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