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Spatial Transcripto...
Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer's Disease
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- Chen, Wei-Ting (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Lu, Ashley (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Craessaerts, Katleen (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Pavie, Benjamin (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;VIB Bio Imaging Core, B-9052 Ghent, Belgium.;VIB Bio Imaging Core, B-3000 Leuven, Belgium.
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- Frigerio, Carlo Sala (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;UCL, UK Dementia Res Inst, London WC1E 6BT, England.
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- Corthout, Nikky (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;VIB Bio Imaging Core, B-9052 Ghent, Belgium.;VIB Bio Imaging Core, B-3000 Leuven, Belgium.
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- Qian, Xiaoyan (author)
- Cartana AB, Nobels Vag 16, S-17165 Solna, Sweden.
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- Lalakova, Jana (author)
- Cartana AB, Nobels Vag 16, S-17165 Solna, Sweden.
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- Kuhnemund, Malte (author)
- Cartana AB, Nobels Vag 16, S-17165 Solna, Sweden.
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- Voytyuk, Iryna (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Wolfs, Leen (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Mancuso, Renzo (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Salta, Evgenia (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Balusu, Sriram (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Snellinx, An (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.
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- Munck, Sebastian (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;VIB Bio Imaging Core, B-9052 Ghent, Belgium.;VIB Bio Imaging Core, B-3000 Leuven, Belgium.
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- Jurek, Aleksandra (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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- Fernandez Navarro, Jose (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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- Saido, Takaomi C. (author)
- RIKEN Brain Sci Inst, Lab Proteolyt Neurosci, Wako, Saitama 3510198, Japan.
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- Huitinga, Inge (author)
- Royal Netherlands Acad Arts & Sci, Netherlands Inst Neurosci, Dept Neuroimmunol, NL-1105 BA Amsterdam, Netherlands.;Univ Amsterdam, Swammerdam Inst Life Sci, NL-1098 XH Amsterdam, Netherlands.
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- Lundeberg, Joakim (author)
- KTH,Science for Life Laboratory, SciLifeLab,Genteknologi
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- Fiers, Mark (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;UCL, UK Dementia Res Inst, London WC1E 6BT, England.
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- De Strooper, Bart (author)
- VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;UCL, UK Dementia Res Inst, London WC1E 6BT, England.
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VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium. VIB Ctr Brain & Dis Res, B-3000 Leuven, Belgium.;Katholieke Univ Leuven, Dept Neurosci, Leuven Brain Inst, B-3000 Leuven, Belgium.;VIB Bio Imaging Core, B-9052 Ghent, Belgium.;VIB Bio Imaging Core, B-3000 Leuven, Belgium. (creator_code:org_t)
- Elsevier BV, 2020
- 2020
- English.
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In: Cell. - : Elsevier BV. - 0092-8674 .- 1097-4172. ; 182:4, s. 976-
- Related links:
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http://www.cell.com/...
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https://urn.kb.se/re...
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https://doi.org/10.1...
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Abstract
Subject headings
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- Although complex inflammatory-like alterations are observed around the amyloid plaques of Alzheimer's disease (AD), little is known about the molecular changes and cellular interactions that characterize this response, We investigate here, in an AD mouse model, the transcriptional changes occurring in tissue domains in a 100-mu m diameter around amyloid plaques using spatial transcriptomics. We demonstrate early alterations in a gene co-expression network enriched for myelin and oligodendrocyte genes (OLIGs), whereas a multicellular gene co-expression network of plaque-induced genes (PIGs) involving the complement system, oxidative stress, lysosomes, and inflammation is prominent in the later phase of the disease. We confirm the majority of the observed alterations at the cellular level using in situ sequencing on mouse and human brain sections. Genome-wide spatial transcriptomics analysis provides an unprecedented approach to untangle the dysregulated cellular network in the vicinity of pathogenic hallmarks of AD and other brain diseases.
Subject headings
- MEDICIN OCH HÄLSOVETENSKAP -- Medicinska och farmaceutiska grundvetenskaper -- Neurovetenskaper (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Basic Medicine -- Neurosciences (hsv//eng)
Publication and Content Type
- ref (subject category)
- art (subject category)
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Cell
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To the university's database
- By the author/editor
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Chen, Wei-Ting
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Lu, Ashley
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Craessaerts, Kat ...
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Pavie, Benjamin
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Frigerio, Carlo ...
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Corthout, Nikky
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Qian, Xiaoyan
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Lalakova, Jana
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Kuhnemund, Malte
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Voytyuk, Iryna
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Wolfs, Leen
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Mancuso, Renzo
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Salta, Evgenia
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Balusu, Sriram
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Snellinx, An
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Munck, Sebastian
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Jurek, Aleksandr ...
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Fernandez Navarr ...
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Saido, Takaomi C ...
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Huitinga, Inge
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Lundeberg, Joaki ...
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Fiers, Mark
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De Strooper, Bar ...
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- About the subject
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Basic Medicine
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and Neurosciences
- Articles in the publication
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Cell
- By the university
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Royal Institute of Technology