Towards decoding the conifer giga-genome

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Fältnamn	Indikatorer	Metadata
000		02970naa a2200481 4500
001		oai:DiVA.org:umu-63769
003		SwePub
008		130107s2012 \| \|\|\|\|\|\|\|\|\|\|\|000 \|\|eng\|
024	7	a https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-637692 URI
024	7	a https://doi.org/10.1007/s11103-012-9961-72 DOI
040		a (SwePub)umu
041		a engb eng
042		9 SwePub
072	7	a ref2 swepub-contenttype
072	7	a for2 swepub-publicationtype
100	1	a Mackay, John4 aut
245	1 0	a Towards decoding the conifer giga-genome
264		c 2012-09-09
264	1	b Springer,c 2012
338		a print2 rdacarrier
520		a Several new initiatives have been launched recently to sequence conifer genomes including pines, spruces and Douglas-fir. Owing to the very large genome sizes ranging from 18 to 35 gigabases, sequencing even a single conifer genome had been considered unattainable until the recent throughput increases and cost reductions afforded by next generation sequencers. The purpose of this review is to describe the context for these new initiatives. A knowledge foundation has been acquired in several conifers of commercial and ecological interest through large-scale cDNA analyses, construction of genetic maps and gene mapping studies aiming to link phenotype and genotype. Exploratory sequencing in pines and spruces have pointed out some of the unique properties of these giga-genomes and suggested strategies that may be needed to extract value from their sequencing. The hope is that recent and pending developments in sequencing technology will contribute to rapidly filling the knowledge vacuum surrounding their structure, contents and evolution. Researchers are also making plans to use comparative analyses that will help to turn the data into a valuable resource for enhancing and protecting the world's conifer forests.
653		a Conifers
653		a Giga-genome sequencing
653		a Functional genomics
653		a Comparative genomics
653		a Integrative studies
700	1	a Dean, Jeffrey F. D.4 aut
700	1	a Plomion, Christophe4 aut
700	1	a Peterson, Daniel G.4 aut
700	1	a Canovas, Francisco M.4 aut
700	1	a Pavy, Nathalie4 aut
700	1	a Ingvarsson, Pär K.u Umeå universitet,Institutionen för ekologi, miljö och geovetenskap4 aut0 (Swepub:umu)pain0001
700	1	a Savolainen, Outi4 aut
700	1	a Angeles Guevara, M.4 aut
700	1	a Fluch, Silvia4 aut
700	1	a Vinceti, Barbara4 aut
700	1	a Abarca, Dolores4 aut
700	1	a Diaz-Sala, Carmen4 aut
700	1	a Cervera, Maria-Teresa4 aut
710	2	a Umeå universitetb Institutionen för ekologi, miljö och geovetenskap4 org
773	0	t Plant Molecular Biologyd : Springerg 80:6, s. 555-569q 80:6<555-569x 0167-4412x 1573-5028
856	4 8	u https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-63769
856	4 8	u https://doi.org/10.1007/s11103-012-9961-7

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By the author/editor: Mackay, John; Dean, Jeffrey F. ...; Plomion, Christo ...; Peterson, Daniel ...; Canovas, Francis ...; Pavy, Nathalie; show more...; Ingvarsson, Pär ...; Savolainen, Outi; Angeles Guevara, ...; Fluch, Silvia; Vinceti, Barbara; Abarca, Dolores; Diaz-Sala, Carme ...; Cervera, Maria-T ...; show less...

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