Sökning: (WFRF:(Papp P.)) > (2010-2014) > Finding needles in ...
Fältnamn | Indikatorer | Metadata |
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000 | 08738naa a2201765 4500 | |
001 | oai:gup.ub.gu.se/200027 | |
003 | SwePub | |
008 | 240528s2014 | |||||||||||000 ||eng| | |
009 | oai:DiVA.org:nrm-1107 | |
024 | 7 | a https://gup.ub.gu.se/publication/2000272 URI |
024 | 7 | a https://doi.org/10.1093/database/bau0612 DOI |
024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-11072 URI |
040 | a (SwePub)gud (SwePub)nrm | |
041 | a eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
072 | 7 | a art2 swepub-publicationtype |
100 | 1 | a Schoch, Conrad L.4 aut |
245 | 1 0 | a Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi |
264 | c 2014-06-30 | |
264 | 1 | b Oxford University Press (OUP),c 2014 |
338 | a electronic2 rdacarrier | |
520 | a DNA phylogenetic comparisons have shown that morphology-based species recognition often underestimates fungal diversity. Therefore, the need for accurate DNA sequence data, tied to both correct taxonomic names and clearly annotated specimen data, has never been greater. Furthermore, the growing number of molecular ecology and microbiome projects using high-throughput sequencing require fast and effective methods for en masse species assignments. In this article, we focus on selecting and re-annotating a set of marker reference sequences that represent each currently accepted order of Fungi. The particular focus is on sequences from the internal transcribed spacer region in the nuclear ribosomal cistron, derived from type specimens and/or ex-type cultures. Re-annotated and verified sequences were deposited in a curated public database at the National Center for Biotechnology Information (NCBI), namely the RefSeq Targeted Loci (RTL) database, and will be visible during routine sequence similarity searches with NR_prefixed accession numbers. A set of standards and protocols is proposed to improve the data quality of new sequences, and we suggest how type and other reference sequences can be used to improve identification of Fungi. | |
650 | 7 | a LANTBRUKSVETENSKAPERx Lantbruksvetenskap, skogsbruk och fiskex Markvetenskap0 (SwePub)401062 hsv//swe |
650 | 7 | a AGRICULTURAL SCIENCESx Agriculture, Forestry and Fisheriesx Soil Science0 (SwePub)401062 hsv//eng |
650 | 7 | a MEDICIN OCH HÄLSOVETENSKAPx Medicinska och farmaceutiska grundvetenskaperx Mikrobiologi inom det medicinska området0 (SwePub)301092 hsv//swe |
650 | 7 | a MEDICAL AND HEALTH SCIENCESx Basic Medicinex Microbiology in the medical area0 (SwePub)301092 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Biologisk systematik0 (SwePub)106122 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Biological Systematics0 (SwePub)106122 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Ekologi0 (SwePub)106112 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Ecology0 (SwePub)106112 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Bioinformatik och systembiologi0 (SwePub)106102 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Bioinformatics and Systems Biology0 (SwePub)106102 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Botanik0 (SwePub)106072 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Botany0 (SwePub)106072 hsv//eng |
650 | 7 | a NATURVETENSKAPx Biologix Mikrobiologi0 (SwePub)106062 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciencesx Microbiology0 (SwePub)106062 hsv//eng |
650 | 7 | a NATURVETENSKAPx Data- och informationsvetenskapx Datavetenskap0 (SwePub)102012 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Computer and Information Sciencesx Computer Sciences0 (SwePub)102012 hsv//eng |
650 | 7 | a NATURVETENSKAPx Data- och informationsvetenskapx Systemvetenskap, informationssystem och informatik0 (SwePub)102022 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Computer and Information Sciencesx Information Systems0 (SwePub)102022 hsv//eng |
653 | a Diversity of life | |
700 | 1 | a Robbertse, Barbara4 aut |
700 | 1 | a Robert, Vincent4 aut |
700 | 1 | a Vu, Duong4 aut |
700 | 1 | a Cardinali, Gianluigi4 aut |
700 | 1 | a Irinyi, Laszlo4 aut |
700 | 1 | a Meyer, Wieland4 aut |
700 | 1 | a Nilsson, R. Henrik,d 1976u Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences4 aut0 (Swepub:gu)xnihen |
700 | 1 | a Hughes, Karen4 aut |
700 | 1 | a Miller, Andrew N.4 aut |
700 | 1 | a Kirk, Paul M.4 aut |
700 | 1 | a Abarenkov, Kessy4 aut |
700 | 1 | a Aime, M. Catherine4 aut |
700 | 1 | a Ariyawansa, Hiran A.4 aut |
700 | 1 | a Bidartondo, Martin4 aut |
700 | 1 | a Boekhout, Teun4 aut |
700 | 1 | a Buyck, Bart4 aut |
700 | 1 | a Cai, Qing4 aut |
700 | 1 | a Chen, Jie4 aut |
700 | 1 | a Crespo, Ana4 aut |
700 | 1 | a Crous, Pedro W.4 aut |
700 | 1 | a Damm, Ulrike4 aut |
700 | 1 | a Beer, Z. Wilhelm De4 aut |
700 | 1 | a Dentinger, Bryn T. M.4 aut |
700 | 1 | a Divakar, Pradeep K.4 aut |
700 | 1 | a Dueñas, Margarita4 aut |
700 | 1 | a Feau, Nicolas4 aut |
700 | 1 | a Fliegerova, Katerina4 aut |
700 | 1 | a García, Miguel A.4 aut |
700 | 1 | a Ge, Zai-Wei4 aut |
700 | 1 | a Griffith, Gareth W.4 aut |
700 | 1 | a Groenewald, Johannes Z.4 aut |
700 | 1 | a Groenewald, Marizeth4 aut |
700 | 1 | a Grube, Martin4 aut |
700 | 1 | a Gryzenhout, Marieka4 aut |
700 | 1 | a Gueidan, Cécile4 aut |
700 | 1 | a Guo, Liangdong4 aut |
700 | 1 | a Hambleton, Sarah4 aut |
700 | 1 | a Hamelin, Richard4 aut |
700 | 1 | a Hansen, Karenu Naturhistoriska riksmuseet,Enheten för botanik4 aut0 (Swepub:nrm)karehans |
700 | 1 | a Hofstetter, Valérie4 aut |
700 | 1 | a Hong, Seung-Beom4 aut |
700 | 1 | a Houbraken, Jos4 aut |
700 | 1 | a Hyde, Kevin D.4 aut |
700 | 1 | a Inderbitzin, Patrik4 aut |
700 | 1 | a Johnston, Peter R.4 aut |
700 | 1 | a Karunarathna, Samantha C.4 aut |
700 | 1 | a Kõljalg, Urmas4 aut |
700 | 1 | a Kovács, Gábor M.4 aut |
700 | 1 | a Kraichak, Ekaphan4 aut |
700 | 1 | a Krizsan, Krisztina4 aut |
700 | 1 | a Kurtzman, Cletus P.4 aut |
700 | 1 | a Larsson, Karl-Henrik,d 19484 aut |
700 | 1 | a Leavitt, Steven4 aut |
700 | 1 | a Letcher, Peter M.4 aut |
700 | 1 | a Liimatainen, Kare4 aut |
700 | 1 | a Liu, Jian-Kui4 aut |
700 | 1 | a Lodge, D. Jean4 aut |
700 | 1 | a Luangsaard, Janet Jennifer4 aut |
700 | 1 | a Lumbsch, H. Thorsten4 aut |
700 | 1 | a Maharachchikumbura, Sajeewa S.N.4 aut |
700 | 1 | a Manamgoda, Dimuthu4 aut |
700 | 1 | a Martín, María P.4 aut |
700 | 1 | a Minnis, Andrew M.4 aut |
700 | 1 | a Moncalvo, Jean-Marc4 aut |
700 | 1 | a Mulè, Giuseppina4 aut |
700 | 1 | a Nakasone, Karen K.4 aut |
700 | 1 | a Niskanen, Tuula4 aut |
700 | 1 | a Olariaga, Ibai4 aut |
700 | 1 | a Papp, Tamás4 aut |
700 | 1 | a Petkovits, Tamás4 aut |
700 | 1 | a Pino-Bodas, Raquel4 aut |
700 | 1 | a Powell, Martha J.4 aut |
700 | 1 | a Raja, Huzefa A.4 aut |
700 | 1 | a Redecker, Dirk4 aut |
700 | 1 | a Sarmiento-Ramirez, J. M.4 aut |
700 | 1 | a Seifert, Keith A.4 aut |
700 | 1 | a Shrestha, Bhushan4 aut |
700 | 1 | a Stenroos, Soili4 aut |
700 | 1 | a Stielow, Benjamin4 aut |
700 | 1 | a Suh, Sung-Oui4 aut |
700 | 1 | a Tanaka, Kazuaki4 aut |
700 | 1 | a Tedersoo, Leho4 aut |
700 | 1 | a Telleria, M. Teresa4 aut |
700 | 1 | a Udayanga, Dhanushka4 aut |
700 | 1 | a Untereiner, Wendy A.4 aut |
700 | 1 | a Uribeondo, Javier Diéguez4 aut |
700 | 1 | a Subbarao, Krishna V.4 aut |
700 | 1 | a Vágvölgyi, Csaba4 aut |
700 | 1 | a Visagie, Cobus4 aut |
700 | 1 | a Voigt, Kerstin4 aut |
700 | 1 | a Walker, Donald M.4 aut |
700 | 1 | a Weir, Bevan S.4 aut |
700 | 1 | a Weiß, Michael4 aut |
700 | 1 | a Wijayawardene, Nalin N.4 aut |
700 | 1 | a Wingfield, Michael J.4 aut |
700 | 1 | a Xu, J. P.4 aut |
700 | 1 | a Yang, Zhu L.4 aut |
700 | 1 | a Zhang, Ning4 aut |
700 | 1 | a Zhuang, Wen-ying4 aut |
700 | 1 | a Federhen, Scott4 aut |
710 | 2 | a Göteborgs universitetb Institutionen för biologi och miljövetenskap4 org |
773 | 0 | t Database: The Journal of Biological Databases and Curationd : Oxford University Press (OUP)g 2014:bau061, s. 1-21q 2014:bau061<1-21x 1758-0463 |
856 | 4 | u https://gup.ub.gu.se/publication/200027x primaryx freey FULLTEXT |
856 | 4 | u https://doi.org/10.1093/database/bau061 |
856 | 4 | u https://doi.org/10.1093/database/bau061y Fulltext |
856 | 4 8 | u https://gup.ub.gu.se/publication/200027 |
856 | 4 8 | u https://doi.org/10.1093/database/bau061 |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-1107 |
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