Sökning: WFRF:(Richardson S.) > (2005-2009) > The genome of black...
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000 | 07467naa a2201849 4500 | |
001 | oai:DiVA.org:umu-14206 | |
003 | SwePub | |
008 | 070524s2006 | |||||||||||000 ||eng| | |
009 | oai:DiVA.org:kth-15989 | |
024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-142062 URI |
024 | 7 | a https://doi.org/10.1126/science.11286912 DOI |
024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-159892 URI |
040 | a (SwePub)umud (SwePub)kth | |
041 | a engb eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
072 | 7 | a art2 swepub-publicationtype |
100 | 1 | a Tuskan, G A4 aut |
245 | 1 0 | a The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). |
264 | 1 | b American Association for the Advancement of Science (AAAS),c 2006 |
338 | a print2 rdacarrier | |
500 | a QC 20100525 | |
520 | a We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. More than 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event; about 8000 pairs of duplicated genes from that event survived in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication, and gross chromosomal rearrangement appear to proceed substantially more slowly in Populus than in Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average from 1.4 to 1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with lignocellulosic wall biosynthesis, meristem development, disease resistance, and metabolite transport. | |
653 | a Arabidopsis/genetics | |
653 | a Chromosome Mapping | |
653 | a Computational Biology | |
653 | a Evolution; Molecular | |
653 | a Expressed Sequence Tags | |
653 | a Gene Duplication | |
653 | a Gene Expression | |
653 | a Genes; Plant | |
653 | a Genome; Plant | |
653 | a Oligonucleotide Array Sequence Analysis | |
653 | a Phylogeny | |
653 | a Plant Proteins/chemistry/genetics | |
653 | a Polymorphism; Single Nucleotide | |
653 | a Populus/*genetics/growth & development/metabolism | |
653 | a Protein Structure; Tertiary | |
653 | a RNA; Plant/analysis | |
653 | a RNA; Untranslated/analysis | |
653 | a Sequence Analysis; DNA | |
700 | 1 | a Difazio, S4 aut |
700 | 1 | a Jansson, Stefanu Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)4 aut0 (Swepub:umu)stja0001 |
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710 | 2 | a Umeå universitetb Institutionen för fysiologisk botanik4 org |
773 | 0 | t Scienced : American Association for the Advancement of Science (AAAS)g 313:5793, s. 1596-604q 313:5793<1596-604x 1095-9203x 0036-8075 |
856 | 4 | u http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids=16973872&dopt=Citation |
856 | 4 | u https://digital.library.unt.edu/ark:/67531/metadc883930/m2/1/high_res_d/901819.pdf |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-14206 |
856 | 4 8 | u https://doi.org/10.1126/science.1128691 |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-15989 |
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