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Sökning: WFRF:(Cohen Eric) > Genetic variation i...

LIBRIS Formathandbok  (Information om MARC21)
FältnamnIndikatorerMetadata
00003956naa a2200637 4500
001oai:DiVA.org:uu-487085
003SwePub
008221024s2001 | |||||||||||000 ||eng|
024a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-4870852 URI
024a https://doi.org/10.1038/ng1001-2232 DOI
040 a (SwePub)uu
041 a engb eng
042 9 SwePub
072 7a ref2 swepub-contenttype
072 7a art2 swepub-publicationtype
100a Rioux, John D.4 aut
2451 0a Genetic variation in the 5q31 cytokine gene cluster confers susceptibility to Crohn disease
264 1b Nature Publishing Group,c 2001
338 a print2 rdacarrier
520 a Linkage disequilibrium (LD) mapping provides a powerful method for fine-structure localization of rare disease genes, but has not yet been widely applied to common disease1. We sought to design a systematic approach for LD mapping and apply it to the localization of a gene (IBD5) conferring susceptibility to Crohn disease. The key issues are: (i) to detect a significant LD signal (ii) to rigorously bound the critical region and (iii) to identify the causal genetic variant within this region. We previously mapped the IBD5 locus to a large region spanning 18 cM of chromosome 5q31 (P<10−4). Using dense genetic maps of microsatellite markers and single-nucleotide polymorphisms (SNPs) across the entire region, we found strong evidence of LD. We bound the region to a common haplotype spanning 250 kb that shows strong association with the disease (P<2×10−7) and contains the cytokine gene cluster. This finding provides overwhelming evidence that a specific common haplotype of the cytokine region in 5q31 confers susceptibility to Crohn disease. However, genetic evidence alone is not sufficient to identify the causal mutation within this region, as strong LD across the region results in multiple SNPs having equivalent genetic evidence—each consistent with the expected properties of the IBD5 locus. These results have important implications for Crohn disease in particular and LD mapping in general.
650 7a MEDICIN OCH HÄLSOVETENSKAPx Medicinska och farmaceutiska grundvetenskaperx Medicinsk genetik0 (SwePub)301072 hsv//swe
650 7a MEDICAL AND HEALTH SCIENCESx Basic Medicinex Medical Genetics0 (SwePub)301072 hsv//eng
700a Daly, Mark J.4 aut
700a Silverberg, Mark S.4 aut
700a Lindblad, Kerstinu Whitehead Institute/Massachusetts Institute of Technology, Center for Genome Research, Cambridge, Massachusetts, USA4 aut0 (Swepub:uu)kerli865
700a Steinhart, Hillary4 aut
700a Cohen, Zane4 aut
700a Delmonte, Terrye4 aut
700a Kocher, Kerry4 aut
700a Miller, Katie4 aut
700a Guschwan, Sheila4 aut
700a Kulbokas, Edward J.4 aut
700a O'Leary, Sinead4 aut
700a Winchester, Ellen4 aut
700a Dewar, Ken4 aut
700a Green, Todd4 aut
700a Stone, Valerie4 aut
700a Chow, Christine4 aut
700a Cohen, Albert4 aut
700a Langelier, Diane4 aut
700a Lapointe, Gilles4 aut
700a Gaudet, Daniel4 aut
700a Faith, Janet4 aut
700a Branco, Nancy4 aut
700a Bull, Shelley B.4 aut
700a McLeod, Robin S.4 aut
700a Griffiths, Anne M.4 aut
700a Bitton, Alain4 aut
700a Greenberg, Gordon R.4 aut
700a Lander, Eric S.4 aut
700a Siminovitch, Katherine A.4 aut
700a Hudson, Thomas J.4 aut
710a Whitehead Institute/Massachusetts Institute of Technology, Center for Genome Research, Cambridge, Massachusetts, USA4 org
773t Nature Geneticsd : Nature Publishing Groupg 29:2, s. 223-228q 29:2<223-228x 1061-4036x 1546-1718
8564 8u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-487085
8564 8u https://doi.org/10.1038/ng1001-223

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