Sökning: WFRF:(Cohen Eric) > Genetic variation i...
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000 | 03956naa a2200637 4500 | |
001 | oai:DiVA.org:uu-487085 | |
003 | SwePub | |
008 | 221024s2001 | |||||||||||000 ||eng| | |
024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-4870852 URI |
024 | 7 | a https://doi.org/10.1038/ng1001-2232 DOI |
040 | a (SwePub)uu | |
041 | a engb eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
072 | 7 | a art2 swepub-publicationtype |
100 | 1 | a Rioux, John D.4 aut |
245 | 1 0 | a Genetic variation in the 5q31 cytokine gene cluster confers susceptibility to Crohn disease |
264 | 1 | b Nature Publishing Group,c 2001 |
338 | a print2 rdacarrier | |
520 | a Linkage disequilibrium (LD) mapping provides a powerful method for fine-structure localization of rare disease genes, but has not yet been widely applied to common disease1. We sought to design a systematic approach for LD mapping and apply it to the localization of a gene (IBD5) conferring susceptibility to Crohn disease. The key issues are: (i) to detect a significant LD signal (ii) to rigorously bound the critical region and (iii) to identify the causal genetic variant within this region. We previously mapped the IBD5 locus to a large region spanning 18 cM of chromosome 5q31 (P<10−4). Using dense genetic maps of microsatellite markers and single-nucleotide polymorphisms (SNPs) across the entire region, we found strong evidence of LD. We bound the region to a common haplotype spanning 250 kb that shows strong association with the disease (P<2×10−7) and contains the cytokine gene cluster. This finding provides overwhelming evidence that a specific common haplotype of the cytokine region in 5q31 confers susceptibility to Crohn disease. However, genetic evidence alone is not sufficient to identify the causal mutation within this region, as strong LD across the region results in multiple SNPs having equivalent genetic evidence—each consistent with the expected properties of the IBD5 locus. These results have important implications for Crohn disease in particular and LD mapping in general. | |
650 | 7 | a MEDICIN OCH HÄLSOVETENSKAPx Medicinska och farmaceutiska grundvetenskaperx Medicinsk genetik0 (SwePub)301072 hsv//swe |
650 | 7 | a MEDICAL AND HEALTH SCIENCESx Basic Medicinex Medical Genetics0 (SwePub)301072 hsv//eng |
700 | 1 | a Daly, Mark J.4 aut |
700 | 1 | a Silverberg, Mark S.4 aut |
700 | 1 | a Lindblad, Kerstinu Whitehead Institute/Massachusetts Institute of Technology, Center for Genome Research, Cambridge, Massachusetts, USA4 aut0 (Swepub:uu)kerli865 |
700 | 1 | a Steinhart, Hillary4 aut |
700 | 1 | a Cohen, Zane4 aut |
700 | 1 | a Delmonte, Terrye4 aut |
700 | 1 | a Kocher, Kerry4 aut |
700 | 1 | a Miller, Katie4 aut |
700 | 1 | a Guschwan, Sheila4 aut |
700 | 1 | a Kulbokas, Edward J.4 aut |
700 | 1 | a O'Leary, Sinead4 aut |
700 | 1 | a Winchester, Ellen4 aut |
700 | 1 | a Dewar, Ken4 aut |
700 | 1 | a Green, Todd4 aut |
700 | 1 | a Stone, Valerie4 aut |
700 | 1 | a Chow, Christine4 aut |
700 | 1 | a Cohen, Albert4 aut |
700 | 1 | a Langelier, Diane4 aut |
700 | 1 | a Lapointe, Gilles4 aut |
700 | 1 | a Gaudet, Daniel4 aut |
700 | 1 | a Faith, Janet4 aut |
700 | 1 | a Branco, Nancy4 aut |
700 | 1 | a Bull, Shelley B.4 aut |
700 | 1 | a McLeod, Robin S.4 aut |
700 | 1 | a Griffiths, Anne M.4 aut |
700 | 1 | a Bitton, Alain4 aut |
700 | 1 | a Greenberg, Gordon R.4 aut |
700 | 1 | a Lander, Eric S.4 aut |
700 | 1 | a Siminovitch, Katherine A.4 aut |
700 | 1 | a Hudson, Thomas J.4 aut |
710 | 2 | a Whitehead Institute/Massachusetts Institute of Technology, Center for Genome Research, Cambridge, Massachusetts, USA4 org |
773 | 0 | t Nature Geneticsd : Nature Publishing Groupg 29:2, s. 223-228q 29:2<223-228x 1061-4036x 1546-1718 |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-487085 |
856 | 4 8 | u https://doi.org/10.1038/ng1001-223 |
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