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Global Spore Sampli...
Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA
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Ovaskainen, Otso (author)
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Abrego, Nerea (author)
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Furneaux, Brendan (author)
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show more...
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Hardwick, Bess (author)
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Somervuo, Panu (author)
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Palorinne, Isabella (author)
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Andrew, Nigel R. (author)
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Babiy, Ulyana V. (author)
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Bao, Tan (author)
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Bazzano, Gisela (author)
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Bondarchuk, Svetlana N. (author)
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Bonebrake, Timothy C. (author)
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Brennan, Georgina L. (author)
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Bret-Harte, Syndonia (author)
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Bässler, Claus (author)
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Cagnolo, Luciano (author)
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Cameron, Erin K. (author)
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Chapurlat, Elodie (author)
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Creer, Simon (author)
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D’Acqui, Luigi P. (author)
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de Vere, Natasha (author)
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Desprez-Loustau, Marie Laure (author)
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Dongmo, Michel A.K. (author)
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Dyrholm Jacobsen, Ida B. (author)
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Fisher, Brian L. (author)
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Flores de Jesus, Miguel (author)
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Gilbert, Gregory S. (author)
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Griffith, Gareth W. (author)
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Gritsuk, Anna A. (author)
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Gross, Andrin (author)
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Grudd, Håkan (author)
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Halme, Panu (author)
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Hanna, Rachid (author)
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Hansen, Jannik (author)
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Hansen, Lars Holst (author)
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Hegbe, Apollon D.M.T. (author)
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Hill, Sarah (author)
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Hogg, Ian D. (author)
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Hultman, Jenni (author)
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Hyde, Kevin D. (author)
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Hynson, Nicole A. (author)
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Ivanova, Natalia (author)
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Karisto, Petteri (author)
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Kerdraon, Deirdre (author)
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Knorre, Anastasia (author)
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Krisai-Greilhuber, Irmgard (author)
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Kurhinen, Juri (author)
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Kuzmina, Masha (author)
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Lecomte, Nicolas (author)
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Lecomte, Erin (author)
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Loaiza, Viviana (author)
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Lundin, Erik (author)
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Meire, Alexander (author)
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Mešić, Armin (author)
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Miettinen, Otto (author)
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Monkhause, Norman (author)
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Mortimer, Peter (author)
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Müller, Jörg (author)
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- Nilsson, R. Henrik, 1976 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences
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Nonti, Puani Yannick C. (author)
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Nordén, Jenni (author)
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Nordén, Björn (author)
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Paz, Claudia (author)
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Pellikka, Petri (author)
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Pereira, Danilo (author)
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Petch, Geoff (author)
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Pitkänen, Juha Matti (author)
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Popa, Flavius (author)
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Potter, Caitlin (author)
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Purhonen, Jenna (author)
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Pätsi, Sanna (author)
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Rafiq, Abdullah (author)
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Raharinjanahary, Dimby (author)
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Rakos, Niklas (author)
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Rathnayaka, Achala R. (author)
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Raundrup, Katrine (author)
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Rebriev, Yury A. (author)
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Rikkinen, Jouko (author)
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Rogers, Hanna M.K. (author)
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Rogovsky, Andrey (author)
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Rozhkov, Yuri (author)
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Runnel, Kadri (author)
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Saarto, Annika (author)
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Savchenko, Anton (author)
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Schlegel, Markus (author)
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Schmidt, Niels Martin (author)
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Seibold, Sebastian (author)
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Skjøth, Carsten (author)
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Stengel, Elisa (author)
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Sutyrina, Svetlana V. (author)
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Syvänperä, Ilkka (author)
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Tedersoo, Leho (author)
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Timm, Jebidiah (author)
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Tipton, Laura (author)
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Toju, Hirokazu (author)
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Uscka-Perzanowska, Maria (author)
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van der Bank, Michelle (author)
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Herman van der Bank, F. (author)
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Vandenbrink, Bryan (author)
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Ventura, Stefano (author)
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(creator_code:org_t)
- 2024
- 2024
- English.
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In: Scientific Data. - 2052-4463. ; 11
- Related links:
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https://gup.ub.gu.se...
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https://doi.org/10.1...
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Abstract
Subject headings
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- Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.
Subject headings
- NATURVETENSKAP -- Geovetenskap och miljövetenskap -- Klimatforskning (hsv//swe)
- NATURAL SCIENCES -- Earth and Related Environmental Sciences -- Climate Research (hsv//eng)
- NATURVETENSKAP -- Biologi -- Biologisk systematik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Biological Systematics (hsv//eng)
- NATURVETENSKAP -- Biologi -- Evolutionsbiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Evolutionary Biology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Mikrobiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Microbiology (hsv//eng)
- NATURVETENSKAP -- Biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences (hsv//eng)
Publication and Content Type
- ref (subject category)
- art (subject category)
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- By the author/editor
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Ovaskainen, Otso
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Abrego, Nerea
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Furneaux, Brenda ...
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Hardwick, Bess
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Somervuo, Panu
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Palorinne, Isabe ...
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show more...
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Andrew, Nigel R.
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Babiy, Ulyana V.
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Bao, Tan
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Bazzano, Gisela
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Bondarchuk, Svet ...
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Bonebrake, Timot ...
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Brennan, Georgin ...
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Bret-Harte, Synd ...
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Bässler, Claus
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Cagnolo, Luciano
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Cameron, Erin K.
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Chapurlat, Elodi ...
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Creer, Simon
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D’Acqui, Luigi P ...
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de Vere, Natasha
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Desprez-Loustau, ...
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Dongmo, Michel A ...
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Dyrholm Jacobsen ...
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Fisher, Brian L.
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Flores de Jesus, ...
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Gilbert, Gregory ...
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Griffith, Gareth ...
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Gritsuk, Anna A.
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Gross, Andrin
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Grudd, Håkan
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Halme, Panu
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Hanna, Rachid
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Hansen, Jannik
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Hansen, Lars Hol ...
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Hegbe, Apollon D ...
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Hill, Sarah
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Hogg, Ian D.
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Hultman, Jenni
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Hyde, Kevin D.
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Hynson, Nicole A ...
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Ivanova, Natalia
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Karisto, Petteri
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Kerdraon, Deirdr ...
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Knorre, Anastasi ...
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Krisai-Greilhube ...
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Kurhinen, Juri
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Kuzmina, Masha
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Lecomte, Nicolas
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Lecomte, Erin
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Loaiza, Viviana
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Lundin, Erik
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Meire, Alexander
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Mešić, Armin
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Miettinen, Otto
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Monkhause, Norma ...
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Mortimer, Peter
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Müller, Jörg
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Nilsson, R. Henr ...
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Nonti, Puani Yan ...
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Nordén, Jenni
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Nordén, Björn
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Paz, Claudia
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Pellikka, Petri
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Pereira, Danilo
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Petch, Geoff
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Pitkänen, Juha M ...
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Popa, Flavius
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Potter, Caitlin
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Purhonen, Jenna
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Pätsi, Sanna
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Rafiq, Abdullah
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Raharinjanahary, ...
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Rakos, Niklas
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Rathnayaka, Acha ...
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Raundrup, Katrin ...
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Rebriev, Yury A.
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Rikkinen, Jouko
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Rogers, Hanna M. ...
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Rogovsky, Andrey
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Rozhkov, Yuri
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Runnel, Kadri
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Saarto, Annika
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Savchenko, Anton
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Schlegel, Markus
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Schmidt, Niels M ...
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Seibold, Sebasti ...
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Skjøth, Carsten
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Stengel, Elisa
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Sutyrina, Svetla ...
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Syvänperä, Ilkka
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Tedersoo, Leho
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Timm, Jebidiah
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Tipton, Laura
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Toju, Hirokazu
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Uscka-Perzanowsk ...
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van der Bank, Mi ...
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Herman van der B ...
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Vandenbrink, Bry ...
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Ventura, Stefano
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Earth and Relate ...
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and Climate Research
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Biological Syste ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Evolutionary Bio ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Bioinformatics a ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Microbiology
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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Scientific Data
- By the university
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University of Gothenburg