Proteomics Standards Initiative's ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms br

↓ Direkt till sidans innehåll
↓ Direkt till sidans sekundära innehåll (sidomenyn)

Search: WFRF:(Van den Bossche Tim) > Proteomics Standard...

1 of 1
Previous record
Next record
To hitlist

Proteomics Standards Initiative's ProForma 2.0 : Unifying the Encoding of Proteoforms and Peptidoforms br

LeDuc, Richard D. (author): Northwestern Univ, Natl Resource Translat & Dev Prote, Evanston, IL 60611 USA.

Deutsch, Eric W. (author): Inst Syst Biol, Seattle, WA 98109 USA.

Binz, Pierre-Alain (author): Lausanne Univ Hosp, Clin Chem Serv, CH-1011 Lausanne, Switzerland.

Fellers, Ryan T. (author): Northwestern Univ, Natl Resource Translat & Dev Prote, Evanston, IL 60611 USA.

Cesnik, Anthony J. (author): KTH,Science for Life Laboratory, SciLifeLab,Cellulär och klinisk proteomik,Stanford Univ, Dept Genet, Stanford, CA 94305 USA.;Chan Zuckerberg Biohub, San Francisco, CA 94158 USA.

Klein, Joshua A. (author): Boston Univ, Program Bioinformat, Boston, MA 02215 USA.

Van den Bossche, Tim (author): VIB UGent Ctr Med Biotechnol, B-9052 Ghent, Belgium.;Univ Ghent, Fac Med & Hlth Sci, Dept Biomol Med, B-9000 Ghent, Belgium.

Gabriels, Ralf (author): VIB UGent Ctr Med Biotechnol, B-9052 Ghent, Belgium.;Univ Ghent, Fac Med & Hlth Sci, Dept Biomol Med, B-9000 Ghent, Belgium.

Yalavarthi, Arshika (author): Northwestern Univ, Natl Resource Translat & Dev Prote, Evanston, IL 60611 USA.

Perez-Riverol, Yasset (author): EMBL European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Cambridge CB10 1SD, England.

Carver, Jeremy (author): UCSD, Ctr Computat Mass Spectrometry, Dept Comp Sci & Engn, La Jolla, CA 92093 USA.;UCSD, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA.

Bittremieux, Wout (author): UCSD, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA.;UCSD, Ctr Computat Mass Spectrometry, La Jolla, CA 92093 USA.

Kawano, Shin (author): Toyama Univ Int Studies, Toyama, Toyama 9301292, Japan.;Res Org Informat & Syst, Joint Support Ctr Data Sci Res, Database Ctr Life Sci, Kashiwa, Chiba 2770871, Japan.

Pullman, Benjamin (author): UCSD, Ctr Computat Mass Spectrometry, La Jolla, CA 92093 USA.;UCSD, Dept Comp Sci & Engn, La Jolla, CA 92093 USA.

Bandeira, Nuno (author): UCSD, Ctr Computat Mass Spectrometry, Dept Comp Sci & Engn, La Jolla, CA 92093 USA.;UCSD, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA.

Kelleher, Neil L. (author): Northwestern Univ, Natl Resource Translat & Dev Prote, Evanston, IL 60611 USA.

Thomas, Paul M. (author): Northwestern Univ, Natl Resource Translat & Dev Prote, Evanston, IL 60611 USA.;AbbVie Inc, 1401 Sheridan Rd, N Chicago, IL 60064 USA.

Vizcaino, Juan Antonio (author): EMBL European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Cambridge CB10 1SD, England.

show less...

Northwestern Univ, Natl Resource Translat & Dev Prote, Evanston, IL 60611 USA Inst Syst Biol, Seattle, WA 98109 USA. (creator_code:org_t)

2022-03-15
2022
English.
In: Journal of Proteome Research. - : American Chemical Society (ACS). - 1535-3893 .- 1535-3907. ; 21:4, s. 1189-1195

Related links:: https://urn.kb.se/re...; show more...; https://doi.org/10.1...; show less...

Journal article (peer-reviewed)

Abstract Subject headings

It is important for the proteomics community to have a standardizedmanner to represent all possible variations of a protein or peptide primary sequence,including natural, chemically induced, and artifactual modifications. The HumanProteome Organization Proteomics Standards Initiative in collaboration with severalmembers of the Consortium for Top-Down Proteomics (CTDP) has developed astandard notation called ProForma 2.0, which is a substantial extension of the originalProForma notation developed by the CTDP. ProForma 2.0 aims to unify therepresentation of proteoforms and peptidoforms. ProForma 2.0 supports use casesneeded for bottom-up and middle-/top-down proteomics approaches and allows theencoding of highly modified proteins and peptides using a human- and machine-readable string. ProForma 2.0 can be used to represent protein modifications in a specified or ambiguous location, designated bymass shifts, chemical formulas, or controlled vocabulary terms, including cross-links (natural and chemical) and atomic isotopes.Notational conventions are based on public controlled vocabularies and ontologies. The most up-to-date full specification documentand information about software implementations are available athttp://psidev.info/proforma.

Find in a library

Journal of Proteome Research (Search for host publication in LIBRIS)

To the university's database

1 of 1
Previous record
Next record
To hitlist

Find more in SwePub

About the subject

NATURAL SCIENCES: NATURAL SCIENCES; and Biological Scien ...; and Biochemistry and ...

Articles in the publication: Journal of Prote ...

By the university: Royal Institute of Technology

Search outside SwePub

Extend your search to:: Google; Google Book Search; Google Scholar

Kungliga biblioteket hanterar dina personuppgifter i enlighet med EU:s dataskyddsförordning (2018), GDPR. Läs mer om hur det funkar här.
Så här hanterar KB dina uppgifter vid användning av denna tjänst.

LIBRIS.kb.se

Proteomics Standards Initiative's ProForma 2.0 : Unifying the Encoding of Proteoforms and Peptidoforms br

Subject headings

Keyword

Publication and Content Type

Find in a library

To the university's database

Find more in SwePub

Search outside SwePub