Image processing assisted algorithms for optical projection tomography

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Fältnamn	Indikatorer	Metadata
000		02641naa a2200385 4500
001		oai:DiVA.org:umu-51582
003		SwePub
008		120127s2012 \| \|\|\|\|\|\|\|\|\|\|\|000 \|\|eng\|
024	7	a https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-515822 URI
024	7	a https://doi.org/10.1109/TMI.2011.21615902 DOI
040		a (SwePub)umu
041		a engb eng
042		9 SwePub
072	7	a ref2 swepub-contenttype
072	7	a art2 swepub-publicationtype
100	1	a Cheddad, Abbas,d 1975-u Umeå universitet,Umeå centrum för molekylär medicin (UCMM),Ulf Ahlgren4 aut0 (Swepub:umu)abch0002
245	1 0	a Image processing assisted algorithms for optical projection tomography
264	1	c 2012
338		a print2 rdacarrier
520		a Since it was first presented in 2002, optical projection tomography (OPT) has emerged as a powerful tool for the study of biomedical specimen on the mm to cm scale. In this paper, we present computational tools to further improve OPT image acquisition and tomographic reconstruction. More specifically, these methods provide: semi-automatic and precise positioning of a sample at the axis of rotation and a fast and robust algorithm for determination of postalignment values throughout the specimen as compared to existing methods. These tools are easily integrated for use with current commercial OPT scanners and should also be possible to implement in "home made" or experimental setups for OPT imaging. They generally contribute to increase acquisition speed and quality of OPT data and thereby significantly simplify and improve a number of three-dimensional and quantitative OPT based assessments.
653		a artifacts
653		a axis of rotation (AR)
653		a biomedical image processing
653		a islets of Langerhans
653		a optical projection tomography (OPT)
653		a pancreas
653		a postalignment
700	1	a Svensson, Christoffer,d 1983-u Umeå universitet,Umeå centrum för molekylär medicin (UCMM),Ulf Ahlgren4 aut0 (Swepub:umu)chsv0004
700	1	a Sharpe, James4 aut
700	1	a Georgsson, Fredriku Umeå universitet,Institutionen för datavetenskap4 aut0 (Swepub:umu)frge0001
700	1	a Ahlgren, Ulf,d 1968-u Umeå universitet,Umeå centrum för molekylär medicin (UCMM),Ulf Ahlgren4 aut0 (Swepub:umu)ulah0001
710	2	a Umeå universitetb Umeå centrum för molekylär medicin (UCMM)4 org
773	0	t IEEE Transactions on Medical Imagingg 31:1, s. 1-15q 31:1<1-15x 0278-0062x 1558-254X
856	4 8	u https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-51582
856	4 8	u https://doi.org/10.1109/TMI.2011.2161590

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Av författaren/redakt...: Cheddad, Abbas, ...; Svensson, Christ ...; Sharpe, James; Georgsson, Fredr ...; Ahlgren, Ulf, 19 ...

Artiklar i publikationen: IEEE Transaction ...

Av lärosätet: Umeå universitet

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