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FAIR+E Pathogen data for surveillance and research : lessons from COVID-19

Neves, Aitana (författare)
SIB Swiss Institute of Bioinformatics, Geneva, Switzerland
Cuesta, Isabel (författare)
Bioinformatics Unit, Institute of Health Carlos III, Madrid, Spain
Hjerde, Erik (författare)
Institute of Chemistry, The Arctic University of Norway, Tromsö, Norway
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Klemetsen, Terje (författare)
Institute of Chemistry, The Arctic University of Norway, Tromsö.
Salgado, David (författare)
CNRS, Institut Français de Bioinformatique, IFB-core, UMS 3601, Evry, France
van Helden, Jacques (författare)
CNRS, Institut Français de Bioinformatique, IFB-core, UMS 3601, Evry, France; Aix-Marseille Univ, INSERM, Lab. Theory and Approaches of Genome Complexity (TAGC), Marseille, France
Rahman, Nadim (författare)
European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, UK
Fatima, Nazeefa (författare)
ELIXIR Norway, Centre for Bioinformatics, University of Oslo, Norway
Karathanasis, Nestoras (författare)
Bioinformatics Department, The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus
Zmora, Pawel (författare)
Department of Molecular Virology, Institute of Bioorganic Chemistry Polish Academy of Sciences, Poznan, Poland
Nyberg Åkerström, Wolmar (författare)
Uppsala universitet,Institutionen för cell- och molekylärbiologi,Science for Life Laboratory, SciLifeLab
Nagaraja Grellscheid, Sushma (författare)
ELIXIR Norway, Department of Informatics, University of Bergen, Norway
Waheed, Zahra (författare)
European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, UK
Blomberg, Niklas (författare)
ELIXIR Hub, Wellcome Genome Campus, Hinxton, Cambridge, UK
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 (creator_code:org_t)
Frontiers Media S.A. 2023
2023
Engelska.
Ingår i: Frontiers In Public Health. - : Frontiers Media S.A.. - 2296-2565. ; 11
Relaterad länk:
https://doi.org/10.5...
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https://uu.diva-port... (primary) (Raw object)
https://urn.kb.se/re...
https://doi.org/10.5...
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  • Tidskriftsartikel (refereegranskat)
Abstract Ämnesord
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  • The COVID-19 pandemic has exemplified the importance of interoperable and equitable data sharing for global surveillance and to support research. While many challenges could be overcome, at least in some countries, many hurdles within the organisational, scientific, technical and cultural realms still remain to be tackled to be prepared for future threats. We propose to (i) continue supporting global efforts that have proven to be efficient and trustworthy towards addressing challenges in pathogen molecular data sharing; (ii) establish a distributed network of Pathogen Data Platforms to (a) ensure high quality data, metadata standardization and data analysis, (b) perform data brokering on behalf of data providers both for research and surveillance, (c) foster capacity building and continuous improvements, also for pandemic preparedness; (iii) establish an International One Health Pathogens Portal, connecting pathogen data isolated from various sources (human, animal, food, environment), in a truly One Health approach and following FAIR principles. To get started in these challenging endeavors, we started an ELIXIR Focus Group and invite all interested experts to join in this concerted, expert-driven effort towards sustaining and ensuring high-quality data for global surveillance and research.

Ämnesord

NATURVETENSKAP  -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
MEDICIN OCH HÄLSOVETENSKAP  -- Hälsovetenskap -- Folkhälsovetenskap, global hälsa, socialmedicin och epidemiologi (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Health Sciences -- Public Health, Global Health, Social Medicine and Epidemiology (hsv//eng)

Nyckelord

pathogen data sharing

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