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FältnamnIndikatorerMetadata
00009296naa a2200865 4500
001oai:DiVA.org:uu-516558
003SwePub
008231128s2023 | |||||||||||000 ||eng|
0247 a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-5165582 URI
0247 a https://doi.org/10.1016/j.cub.2023.08.0262 DOI
040 a (SwePub)uu
041 a engb eng
042 9 SwePub
072 7a ref2 swepub-contenttype
072 7a art2 swepub-publicationtype
1001 a Hendriks, Kasper P.u Univ Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.;Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.4 aut
2451 0a Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset
264 1b Elsevier,c 2023
338 a electronic2 rdacarrier
520 a The mustard family (Brassicaceae) is a scientifically and economically important family, containing the model plant Arabidopsis thaliana and numerous crop species that feed billions worldwide. Despite its relevance, most phylogenetic trees of the family are incompletely sampled and often contain poorly supported branches. Here, we present the most complete Brassicaceae genus-level family phylogenies to date (Bras-sicaceae Tree of Life or BrassiToL) based on nuclear (1,081 genes, 319 of the 349 genera; 57 of the 58 tribes) and plastome (60 genes, 265 genera; all tribes) data. We found cytonuclear discordance between the two, which is likely a result of rampant hybridization among closely and more distantly related lineages. To eval-uate the impact of such hybridization on the nuclear phylogeny reconstruction, we performed five different gene sampling routines, which increasingly removed putatively paralog genes. Our cleaned subset of 297 genes revealed high support for the tribes, whereas support for the main lineages (supertribes) was moder-ate. Calibration based on the 20 most clock-like nuclear genes suggests a late Eocene to late Oligocene origin of the family. Finally, our results strongly support a recently published new family classification, dividing the family into two subfamilies (one with five supertribes), together representing 58 tribes. This includes five recently described or re-established tribes, including Arabidopsideae, a monogeneric tribe accommodating Arabidopsis without any close relatives. With a worldwide community of thousands of researchers working on Brassicaceae and its diverse members, our new genus-level family phylogeny will be an indispensable tool for studies on biodiversity and plant biology.
650 7a NATURVETENSKAPx Biologix Botanik0 (SwePub)106072 hsv//swe
650 7a NATURAL SCIENCESx Biological Sciencesx Botany0 (SwePub)106072 hsv//eng
650 7a NATURVETENSKAPx Biologix Biologisk systematik0 (SwePub)106122 hsv//swe
650 7a NATURAL SCIENCESx Biological Sciencesx Biological Systematics0 (SwePub)106122 hsv//eng
7001 a Kiefer, Christianeu Heidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.4 aut
7001 a Al-Shehbaz, Ihsan A.u Missouri Bot Garden, 4344 Shaw Blvd, St. Louis, MO 63110 USA.4 aut
7001 a Bailey, C. Donovanu New Mexico State Univ, Dept Biol, POB 30001, MSC 3AF, Las Cruces, NM 88003 USA.4 aut
7001 a van Huysduynen, Alex Hooftu Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.;Univ Antwerp, Dept Biol, Groenenborgerlaan 171, B-2020 Antwerp, Belgium.4 aut
7001 a Nikolov, Lachezar A.u Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, 610 Charles E Young Dr S, Los Angeles, CA 90095 USA.4 aut
7001 a Nauheimer, Larsu James Cook Univ, Australian Trop Herbarium, POB 6811, Cairns, Qld 4870, Australia.4 aut
7001 a Zuntini, Alexandre R.u Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.4 aut
7001 a German, Dmitry A.u Altai State Univ, South Siberian Bot Garden, Lesosechnaya Ulitsa, 25, Barnaul, Altai Krai, Russia.4 aut
7001 a Franzke, Andreasu Heidelberg Univ, Heidelberg Bot Garden, Neuenheimer Feld 361, D-69120 Heidelberg, Germany.4 aut
7001 a Koch, Marcus A.u Heidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.4 aut
7001 a Lysak, Martin A.u Masaryk Univ, CEITEC Cent European Inst Technol, Kamenice 5, Brno 62500, Czech Republic.4 aut
7001 a Toro-Nunez, Oscaru Univ Concepcion, Barrio Univ, Dept Bot, Concepcion, Chile.4 aut
7001 a Ozudogru, Barisu Hacettepe Univ, Dept Biol, TR-06800 Ankara, Turkiye.4 aut
7001 a Invernon, Vanessa R.u Sorbonne Univ, Museum Natl dHist Nat CNRS, Inst Systemat Evolut Biodivers ISYEB, EPHE, UA 57 rue Cuvier,CP 51, F-75005 Paris, France.4 aut
7001 a Walden, Norau Heidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.4 aut
7001 a Maurin, Olivieru Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.4 aut
7001 a Hay, Nikolai M.u Duke Univ, Dept Biol, Durham, NC 27708 USA.4 aut
7001 a Shushkov, Philipu Indiana Univ, Dept Chem, 800 E Kirkwood Ave, Bloomington, IN 47405 USA.4 aut
7001 a Mandakova, Terezieu Masaryk Univ, CEITEC Cent European Inst Technol, Kamenice 5, Brno 62500, Czech Republic.4 aut
7001 a Schranz, M. Ericu Wageningen Univ, Biosystemat Grp, Droevendaalsesteeg 1, NL-6708 PB Wageningen, Netherlands.4 aut
7001 a Thulin, Mats,d 1948-u Uppsala universitet,Systematisk biologi4 aut0 (Swepub:uu)matsthul
7001 a Windham, Michael D.u Duke Univ, Dept Biol, Durham, NC 27708 USA.4 aut
7001 a Resetnik, Ivanau Univ Zagreb, Dept Biol, Marulicev trg 20-2, Zagreb 10000, Croatia.4 aut
7001 a Spaniel, Stanislavu Slovak Acad Sci, Inst Bot, Plant Sci & Biodivers Ctr, Dubravskacesta 9, Bratislava 84523, Slovakia.4 aut
7001 a Ly, Elfyu Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.;European Ctr Excellence Sustainable Water Technol, Wetsus, Oostergoweg 9, NL-8911 MA Leeuwarden, Netherlands.;Delft Univ Technol, Dept Biotechnol, Maasweg 9, NL-2629 HZ Delft, Netherlands.4 aut
7001 a Pires, J. Chrisu Colorado State Univ, Soil & Crop Sci, 307 Univ Ave, Ft Collins, CO 80523 USA.4 aut
7001 a Harkess, Alexu HudsonAlpha Inst Biotechnol, 601 Genome Way Northwest, Huntsville, AL 35806 USA.4 aut
7001 a Neuffer, Barbarau Univ Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.4 aut
7001 a Vogt, Robertu Bot Garten & Bot Museum Berlin, Konigin Luise Str 6-8, D-14195 Berlin, Germany.4 aut
7001 a Brauchler, Christianu Nat Hist Museum Vienna, Dept Bot, Burgring 7, A-1010 Vienna, Austria.4 aut
7001 a Rainer, Heimou Nat Hist Museum Vienna, Dept Bot, Burgring 7, A-1010 Vienna, Austria.4 aut
7001 a Janssens, Steven B.u Katholieke Univ Leuven, Dept Biol, Kasteelpark Arenberg 31, POB 2435, B-3001 Leuven, Belgium.;Meise Bot Garden, Nieuwelaan 38, B-1860 Meise, Belgium.4 aut
7001 a Schmull, Michaelau Harvard Univ Herbaria, 22 Divin Ave, Cambridge, MA 02138 USA.4 aut
7001 a Forrest, Alanu Royal Bot Garden Edinburgh, Ctr Middle Eastern Plants, 20A Inverleith Row, Edinburgh EH3 5LR, Midlothian, Scotland.4 aut
7001 a Guggisberg, Alessiau Swiss Fed Inst Technol, Inst Integrat Biol, CH-8092 Zurich, Switzerland.4 aut
7001 a Zmarzty, Sueu Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.4 aut
7001 a Lepschi, Brendan J.u Australian Natl Herbarium, Ctr Australian Natl Biodivers Res, Clunies Ross St, Acton, ACT 2601, Australia.4 aut
7001 a Scarlett, Nevilleu La Trobe Univ, Plenty Rd & Kingsbury Dr, Bundoora, Vic 3086, Australia.4 aut
7001 a Stauffer, Fred W.u Conservat & Bot Gardens Geneva, CP 60, CH-1292 Geneva, Switzerland.4 aut
7001 a Schonberger, Inesu Allan Herbarium, Manaaki Whenua Landcare Res, POB 69040, Lincoln 7640, New Zealand.4 aut
7001 a Heenan, Peteru Allan Herbarium, Manaaki Whenua Landcare Res, POB 69040, Lincoln 7640, New Zealand.4 aut
7001 a Baker, William J.u Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.4 aut
7001 a Forest, Felixu Royal Bot Gardens Kew, Richmond TW9 3AE, Surrey, England.4 aut
7001 a Mummenhoff, Klausu Univ Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.4 aut
7001 a Lens, Fredericu Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.;Leiden Univ, Inst Biol Leiden, Plant Sci, Sylviusweg 72, NL-2333 BE Leiden, Netherlands.4 aut
7102 a Univ Osnabruck, Dept Biol Bot, Barbarastr 11, D-49076 Osnabruck, Germany.;Nat Biodivers Ctr, Funct Traits Grp, Darwinweg 2, NL-2333 CR Leiden, Netherlands.b Heidelberg Univ, Ctr Org Studies, COS, Neuenheimer Feld 345, D-69120 Heidelberg, Germany.4 org
7730 t Current Biologyd : Elsevierg 33:19, s. 4052-4068q 33:19<4052-4068x 0960-9822x 1879-0445
8564 u https://doi.org/10.1016/j.cub.2023.08.026y Fulltext
8564 u https://uu.diva-portal.org/smash/get/diva2:1815338/FULLTEXT01.pdfx primaryx Raw objecty fulltext:print
8564 8u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-516558
8564 8u https://doi.org/10.1016/j.cub.2023.08.026

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