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Adopting transfer l...
Adopting transfer learning for neuroimaging : a comparative analysis with a custom 3D convolution neural network model
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- Soliman, Amira, 1980- (author)
- Högskolan i Halmstad,Akademin för informationsteknologi,Halmstad Univ, Sweden
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- Chang, Jose R. (author)
- Högskolan i Halmstad,Akademin för informationsteknologi,National Cheng Kung University, Tainan, Taiwan,Halmstad Univ, Sweden; Natl Cheng Kung Univ Tainan, Taiwan
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- Etminani, Kobra, 1984- (author)
- Högskolan i Halmstad,Akademin för informationsteknologi,Halmstad Univ, Sweden
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- Byttner, Stefan, 1975- (author)
- Halmstad Univ, Sweden
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- Davidsson, Anette (author)
- Linköpings universitet,Avdelningen för diagnostik och specialistmedicin,Medicinska fakulteten,Region Östergötland, Fysiologiska kliniken US
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- Martínez-Sanchis, Begoña (author)
- Hospital Universitario La Fe, Valencia, Spain,La Fe Univ Hosp, Spain
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- Camacho, Valle (author)
- Universitat Autònoma De Barcelona, Cerdanyola del Valles, Spain,Univ Autonoma Barcelona, Spain
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- Bauckneht, Matteo (author)
- Irccs San Martino Polyclinic Hospital, Genoa, Italy,IRCCS Osped Policlin San Martino, Italy
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- Stegeran, Roxana (author)
- University Hospital, Linkoping, Sweden,Region Östergötland, Röntgenkliniken i Linköping
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- Ressner, Marcus (author)
- Linköpings universitet,Avdelningen för diagnostik och specialistmedicin,Medicinska fakulteten,Region Östergötland, Medicinsk strålningsfysik
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- Agudelo-Cifuentes, Marc (author)
- Hospital Universitario La Fe, Valencia, Spain,La Fe Univ Hosp, Spain
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- Chincarini, Andrea (author)
- Infn Sezione Di Genova, Genoa, Italy,Natl Inst Nucl Phys INFN, Italy
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- Brendel, Matthias (author)
- Klinikum Der Universität München, Munich, Germany,Ludwig Maximilians Univ Munchen, Germany
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- Rominger, Axel (author)
- Inselspital, Bern, Switzerland,Univ Hosp Bern, Switzerland
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- Bruffaerts, Rose (author)
- University Of Antwerp, Antwerpen, Belgium,Univ Antwerp, Belgium
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- Vandenberghe, Rik (author)
- Department Of Neurosciences, Leuven, Belgium; University Hospitals Leuven, Leuven, Belgium,KU, Belgium; Univ Hosp Leuven, Belgium
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- Kramberger, Milica G. (author)
- Karolinska Institutet
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- Trost, Maja (author)
- University Medical Centre Ljubljana, Ljubljana, Slovenia; Faculty Of Medicine, Ljubljana, Slovenia,Univ Med Ctr, Slovenia; Univ Ljubljana, Slovenia
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- Nicastro, Nicolas (author)
- Geneva University Hospitals, Geneva, Switzerland,Geneva Univ Hosp, Switzerland,Vrije Univ Amsterdam, Netherlands
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- Frisoni, Giovanni B. (author)
- Geneva University Hospitals, Geneva, Switzerland,Univ Hosp, Switzerland
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- Lemstra, Afina W. (author)
- Vu University Medical Center, Amsterdam, Netherlands,VU Med Ctr Alzheimer Ctr, Netherlands
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- Berckel, Bart N.M.van (author)
- Vrije Universiteit Amsterdam, Amsterdam, Netherlands
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- Pilotto, Andrea (author)
- University Of Brescia, Brescia, Italy,Univ Brescia, Italy
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- Padovani, Alessandro (author)
- Irccs San Martino Polyclinic Hospital, Genoa, Italy,IRCCS Osped Policlin San Martino, Italy
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- Morbelli, Silvia (author)
- Stavanger University Hospital, Stavanger, Norway,Stavanger Univ Hosp, Norway
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- Aarsland, Dag (author)
- Karolinska Institutet
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- Nobili, Flavio (author)
- University Of Genoa, Genoa, Italy,Univ Genoa, Italy
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- Garibotto, Valentina (author)
- Geneva University Hospitals, Geneva, Switzerland,Univ Geneva, Switzerland; Univ Geneva, Switzerland
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- Ochoa-Figueroa, Miguel (author)
- Linköpings universitet,Institutionen för hälsa, medicin och vård,Medicinska fakulteten,Centrum för medicinsk bildvetenskap och visualisering, CMIV,Region Östergötland, Fysiologiska kliniken US,Region Östergötland, Röntgenkliniken i Linköping
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(creator_code:org_t)
- 2022-12-07
- 2022
- English.
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In: BMC Medical Informatics and Decision Making. - London : BioMed Central (BMC). - 1472-6947. ; 22, s. 1-15
- Related links:
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https://doi.org/10.1...
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https://liu.diva-por... (primary) (Raw object)
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https://urn.kb.se/re...
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https://doi.org/10.1...
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Abstract
Subject headings
Close
- Background: In recent years, neuroimaging with deep learning (DL) algorithms have made remarkable advances in the diagnosis of neurodegenerative disorders. However, applying DL in different medical domains is usually challenged by lack of labeled data. To address this challenge, transfer learning (TL) has been applied to use state-of-the-art convolution neural networks pre-trained on natural images. Yet, there are differences in characteristics between medical and natural images, also image classification and targeted medical diagnosis tasks. The purpose of this study is to investigate the performance of specialized and TL in the classification of neurodegenerative disorders using 3D volumes of 18F-FDG-PET brain scans. Results: Results show that TL models are suboptimal for classification of neurodegenerative disorders, especially when the objective is to separate more than two disorders. Additionally, specialized CNN model provides better interpretations of predicted diagnosis. Conclusions: TL can indeed lead to superior performance on binary classification in timely and data efficient manner, yet for detecting more than a single disorder, TL models do not perform well. Additionally, custom 3D model performs comparably to TL models for binary classification, and interestingly perform better for diagnosis of multiple disorders. The results confirm the superiority of the custom 3D-CNN in providing better explainable model compared to TL adopted ones. © 2022, The Author(s).
Subject headings
- NATURVETENSKAP -- Data- och informationsvetenskap -- Datorseende och robotik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Computer Vision and Robotics (hsv//eng)
- MEDICIN OCH HÄLSOVETENSKAP -- Medicinsk bioteknologi -- Biomedicinsk laboratorievetenskap/teknologi (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Medical Biotechnology -- Biomedical Laboratory Science/Technology (hsv//eng)
Keyword
- Brain Neurodegenerative Disorders
- Convolution Neural Networks
- Medical Image Classification
- Transfer Learning
Publication and Content Type
- ref (subject category)
- art (subject category)
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Soliman, Amira, ...
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Chang, Jose R.
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Etminani, Kobra, ...
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Byttner, Stefan, ...
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Davidsson, Anett ...
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Martínez-Sanchis ...
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show more...
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Camacho, Valle
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Bauckneht, Matte ...
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Stegeran, Roxana
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Ressner, Marcus
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Agudelo-Cifuente ...
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Chincarini, Andr ...
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Brendel, Matthia ...
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Rominger, Axel
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Bruffaerts, Rose
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Vandenberghe, Ri ...
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Kramberger, Mili ...
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Trost, Maja
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Nicastro, Nicola ...
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Frisoni, Giovann ...
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Lemstra, Afina W ...
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Berckel, Bart N. ...
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Pilotto, Andrea
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Padovani, Alessa ...
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Morbelli, Silvia
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Aarsland, Dag
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Nobili, Flavio
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Garibotto, Valen ...
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Ochoa-Figueroa, ...
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Computer and Inf ...
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and Computer Vision ...
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Medical Biotechn ...
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and Biomedical Labor ...
- Articles in the publication
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BMC Medical Info ...
- By the university
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Halmstad University
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Linköping University
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Karolinska Institutet