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FältnamnIndikatorerMetadata
00006124naa a2201393 4500
001oai:prod.swepub.kib.ki.se:141150866
003SwePub
008240701s2019 | |||||||||||000 ||eng|
024a http://kipublications.ki.se/Default.aspx?queryparsed=id:1411508662 URI
024a https://doi.org/10.1136/annrheumdis-2018-2141272 DOI
040 a (SwePub)ki
041 a engb eng
042 9 SwePub
072 7a ref2 swepub-contenttype
072 7a art2 swepub-publicationtype
100a Acosta-Herrera, M4 aut
2451 0a Genome-wide meta-analysis reveals shared new loci in systemic seropositive rheumatic diseases
264 c 2018-12-20
264 1b BMJ,c 2019
520 a Immune-mediated inflammatory diseases (IMIDs) are heterogeneous and complex conditions with overlapping clinical symptoms and elevated familial aggregation, which suggests the existence of a shared genetic component. In order to identify this genetic background in a systematic fashion, we performed the first cross-disease genome-wide meta-analysis in systemic seropositive rheumatic diseases, namely, systemic sclerosis, systemic lupus erythematosus, rheumatoid arthritis and idiopathic inflammatory myopathies.MethodsWe meta-analysed ~6.5 million single nucleotide polymorphisms in 11 678 cases and 19 704 non-affected controls of European descent populations. The functional roles of the associated variants were interrogated using publicly available databases.ResultsOur analysis revealed five shared genome-wide significant independent loci that had not been previously associated with these diseases: NAB1, KPNA4-ARL14, DGQK, LIMK1 and PRR12. All of these loci are related with immune processes such as interferon and epidermal growth factor signalling, response to methotrexate, cytoskeleton dynamics and coagulation cascade. Remarkably, several of the associated loci are known key players in autoimmunity, which supports the validity of our results. All the associated variants showed significant functional enrichment in DNase hypersensitivity sites, chromatin states and histone marks in relevant immune cells, including shared expression quantitative trait loci. Additionally, our results were significantly enriched in drugs that are being tested for the treatment of the diseases under study.ConclusionsWe have identified shared new risk loci with functional value across diseases and pinpoint new potential candidate loci that could be further investigated. Our results highlight the potential of drug repositioning among related systemic seropositive rheumatic IMIDs.
700a Kerick, M4 aut
700a Gonzalez-Serna, D4 aut
700a Wijmenga, C4 aut
700a Franke, A4 aut
700a Gregersen, PK4 aut
700a Padyukov, Lu Karolinska Institutet4 aut
700a Worthington, J4 aut
700a Vyse, TJ4 aut
700a Alarcon-Riquelme, MEu Karolinska Institutet4 aut
700a Mayes, MD4 aut
700a Martin, J4 aut
700a Miller, FW4 aut
700a Chen, W4 aut
700a O'Hanlon, TP4 aut
700a Cooper, RG4 aut
700a Vencovsky, J4 aut
700a Rider, LG4 aut
700a Danko, K4 aut
700a Wedderburn, LR4 aut
700a Lundberg, IEu Karolinska Institutet4 aut
700a Pachman, LM4 aut
700a Reed, AM4 aut
700a Ytterberg, SR4 aut
700a Selva-O'Callaghan, A4 aut
700a Radstake, TR4 aut
700a Isenberg, DA4 aut
700a Chinoy, H4 aut
700a Ollier, WER4 aut
700a Scheet, P4 aut
700a Peng, B4 aut
700a Lee, A4 aut
700a Lamb, JA4 aut
700a Amos, CI4 aut
700a Denton, C4 aut
700a Hilton-Jones, D4 aut
700a Plotz, PH4 aut
700a Varsani, H4 aut
700a Radstake, TRDJ4 aut
700a Gorlova, O4 aut
700a Rueda, B4 aut
700a Martin, JE4 aut
700a Alizadeh, BZ4 aut
700a Palomino-Morales, R4 aut
700a Coenen, MJ4 aut
700a Vonk, MC4 aut
700a Voskuyl, AE4 aut
700a Scheurwegh, AJ4 aut
700a Broen, JC4 aut
700a van Riel, PLCM4 aut
700a van 't Slot, R4 aut
700a Italiaander, A4 aut
700a Ophoff, RA4 aut
700a Riemekasten, G4 aut
700a Hunzelmann, N4 aut
700a Simeon, CP4 aut
700a Ortego-Centeno, N4 aut
700a Gonzalez-Gay, MA4 aut
700a Gonzalez-Escribano, MF4 aut
700a Airo, P4 aut
700a van Laar, J4 aut
700a Herrick, A4 aut
700a Hesselstrand, R4 aut
700a Smith, V4 aut
700a de Keyser, F4 aut
700a Houssiau, F4 aut
700a Chee, MM4 aut
700a Madhok, R4 aut
700a Shiels, P4 aut
700a Westhovens, R4 aut
700a Kreuter, A4 aut
700a Kiener, H4 aut
700a de Baere, E4 aut
700a Witte, T4 aut
700a Klareskog, Lu Karolinska Institutet4 aut
700a Beretta, L4 aut
700a Scorza, R4 aut
700a Lie, BA4 aut
700a Hoffman-Vold, AM4 aut
700a Carreira, P4 aut
700a Varga, J4 aut
700a Hinchcliff, M4 aut
700a Lee, AT4 aut
700a Ying, J4 aut
700a Han, Y4 aut
700a Weng, SF4 aut
700a Wigley, FM4 aut
700a Hummers, L4 aut
700a Nelson, JL4 aut
700a Agarwal, SK4 aut
700a Assassi, S4 aut
700a Gourh, P4 aut
700a Tan, FK4 aut
700a Koeleman, BPC4 aut
700a Arnett, FC4 aut
710a Karolinska Institutet4 org
773t Annals of the rheumatic diseasesd : BMJg 78:3, s. 311-319q 78:3<311-319x 1468-2060x 0003-4967
856u https://europepmc.org/articles/pmc6800208?pdf=render
8564 8u http://kipublications.ki.se/Default.aspx?queryparsed=id:141150866
8564 8u https://doi.org/10.1136/annrheumdis-2018-214127

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