Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser

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Fältnamn	Indikatorer	Metadata
000		11314naa a2201021 4500
001		oai:DiVA.org:uu-314814
003		SwePub
008		170206s2016 \| \|\|\|\|\|\|\|\|\|\|\|000 \|\|eng\|
024	7	a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-3148142 URI
024	7	a https://doi.org/10.1038/sdata.2016.602 DOI
040		a (SwePub)uu
041		a engb eng
042		9 SwePub
072	7	a ref2 swepub-contenttype
072	7	a art2 swepub-publicationtype
100	1	a Ekeberg, Tomasu Uppsala universitet,Molekylär biofysik,DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut0 (Swepub:uu)tomek611
245	1 0	a Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser
264		c 2016-08-01
264	1	b Springer Science and Business Media LLC,c 2016
338		a electronic2 rdacarrier
520		a Free-electron lasers (FEL) hold the potential to revolutionize structural biology by producing X-ray pules short enough to outrun radiation damage, thus allowing imaging of biological samples without the limitation from radiation damage. Thus, a major part of the scientific case for the first FELs was three-dimensional (3D) reconstruction of non-crystalline biological objects. In a recent publication we demonstrated the first 3D reconstruction of a biological object from an X-ray FEL using this technique. The sample was the giant Mimivirus, which is one of the largest known viruses with a diameter of 450 nm. Here we present the dataset used for this successful reconstruction. Data-analysis methods for single-particle imaging at FELs are undergoing heavy development but data collection relies on very limited time available through a highly competitive proposal process. This dataset provides experimental data to the entire community and could boost algorithm development and provide a benchmark dataset for new algorithms.
650	7	a NATURVETENSKAPx Fysikx Atom- och molekylfysik och optik0 (SwePub)103022 hsv//swe
650	7	a NATURAL SCIENCESx Physical Sciencesx Atom and Molecular Physics and Optics0 (SwePub)103022 hsv//eng
700	1	a Svenda, Martinu Uppsala universitet,Molekylär biofysik4 aut0 (Swepub:uu)msv31659
700	1	a Seibert, M. Marvinu Uppsala universitet,Molekylär biofysik4 aut0 (Swepub:uu)masei255
700	1	a Abergel, Chantalu CNRS, Informat Genom & Struct UMR7256, Parc Sci Luminy,Case 934, F-13288 Marseille 9, France.;Aix Marseille Univ, Inst Microbiol Mediterranee FR3479, Parc Sci Luminy,Case 934, F-13288 Marseille 9, France.4 aut
700	1	a Maia, Filipe R.N.C.u Uppsala universitet,Molekylär biofysik4 aut0 (Swepub:uu)fimai103
700	1	a Seltzer, Virginieu CNRS, Informat Genom & Struct UMR7256, Parc Sci Luminy,Case 934, F-13288 Marseille 9, France.;Aix Marseille Univ, Inst Microbiol Mediterranee FR3479, Parc Sci Luminy,Case 934, F-13288 Marseille 9, France.4 aut
700	1	a DePonte, Daniel P.u SLAC Natl Accelerator Lab, LCLS, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Aquila, Andrewu SLAC Natl Accelerator Lab, LCLS, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.;European XFEL, Albert Einstein Ring 19, D-22761 Hamburg, Germany.4 aut
700	1	a Andreasson, Jakobu Uppsala universitet,Molekylär biofysik4 aut0 (Swepub:uu)jakan998
700	1	a Iwan, Biancau Uppsala universitet,Molekylär biofysik,Ctr Etud Saclay, Commissariat Energie Atom & Energies Alternat, F-91191 Gif Sur Yvette, France.4 aut0 (Swepub:uu)biaiw419
700	1	a Jönsson, H. Olofu Uppsala universitet,Molekylär biofysik,Molekyl- och kondenserade materiens fysik4 aut0 (Swepub:uu)olojo993
700	1	a Westphal, Danielu Uppsala universitet,Molekylär biofysik4 aut0 (Swepub:uu)danwe345
700	1	a Odic, Duskou Uppsala universitet,Molekylär biofysik4 aut
700	1	a Andersson, Ingeru Uppsala universitet,Molekylär biofysik4 aut0 (Swepub:uu)inand172
700	1	a Barty, Antonu DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Liang, Mengu DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;SLAC Natl Accelerator Lab, LCLS, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Martin, Andrew V.u DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Univ Melbourne, 161 Barry St, Melbourne, Vic 3010, Australia.4 aut
700	1	a Gumprecht, Larsu DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Fleckenstein, Holgeru DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Bajt, Sasau DESY, Photon Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Barthelmess, Miriamu DESY, Photon Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Coppola, Nicolau DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Claverie, Jean-Michelu CNRS, Informat Genom & Struct UMR7256, Parc Sci Luminy,Case 934, F-13288 Marseille 9, France.;Aix Marseille Univ, Inst Microbiol Mediterranee FR3479, Parc Sci Luminy,Case 934, F-13288 Marseille 9, France.4 aut
700	1	a Loh, N. Duaneu SLAC Natl Accelerator Lab, Stanford PULSE Inst, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.;Natl Univ Singapore, Ctr BioImaging Sci, 14 Sci Dr 4 Blk S1 A, Singapore 117546, Singapore.4 aut
700	1	a Bostedt, Christophu SLAC Natl Accelerator Lab, LCLS, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Bozek, John D.u Synchrotron SOLEIL, Lorme Merisiers Roundabout St Aubin, F-91190 St Aubin, France.4 aut
700	1	a Krzywinski, Jaceku SLAC Natl Accelerator Lab, LCLS, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Messerschmidt, Marcu SLAC Natl Accelerator Lab, LCLS, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Bogan, Michael J.u SLAC Natl Accelerator Lab, Stanford PULSE Inst, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Hampton, Christina Y.u SLAC Natl Accelerator Lab, Stanford PULSE Inst, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Sierra, Raymond G.u SLAC Natl Accelerator Lab, Stanford PULSE Inst, 2575 Sand Hill Rd, Menlo Pk, CA 94025 USA.4 aut
700	1	a Frank, Matthiasu Lawrence Livermore Natl Lab, 7000 East Ave,Mail Stop L-211, Livermore, CA 94551 USA.4 aut
700	1	a Shoeman, Robert L.4 aut
700	1	a Lomb, Lukasu Max Planck Inst Med Res, Jahnstr 29, D-69120 Heidelberg, Germany.4 aut
700	1	a Foucar, Lutzu Max Planck Inst Med Res, Jahnstr 29, D-69120 Heidelberg, Germany.;Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Epp, Sascha W.u Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Max Planck Inst Kernphys, Saupfercheckweg 1, D-69117 Heidelberg, Germany.4 aut
700	1	a Rolles, Danielu Max Planck Inst Med Res, Jahnstr 29, D-69120 Heidelberg, Germany.;Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Kansas State Univ, Dept Phys, JR Macdonald Lab, 116 Cardwell Hall, Manhattan, KS 66506 USA.4 aut
700	1	a Rudenko, Artemu Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Max Planck Inst Kernphys, Saupfercheckweg 1, D-69117 Heidelberg, Germany.;Kansas State Univ, Dept Phys, JR Macdonald Lab, 116 Cardwell Hall, Manhattan, KS 66506 USA.4 aut
700	1	a Hartmann, Robertu PNSensor GmbH, Otto Hahn Ring 6, D-81739 Munich, Germany.4 aut
700	1	a Hartmann, Andreasu PNSensor GmbH, Otto Hahn Ring 6, D-81739 Munich, Germany.4 aut
700	1	a Kimmel, Nilsu Max Planck Inst Halbleiterlabor, Otto Hahn Ring 6, D-81739 Munich, Germany.;Max Planck Inst Extraterr Phys, Giessenbachstr, D-85741 Garching, Germany.4 aut
700	1	a Holl, Peteru PNSensor GmbH, Otto Hahn Ring 6, D-81739 Munich, Germany.4 aut
700	1	a Weidenspointner, Georgu Max Planck Inst Halbleiterlabor, Otto Hahn Ring 6, D-81739 Munich, Germany.;Max Planck Inst Extraterr Phys, Giessenbachstr, D-85741 Garching, Germany.4 aut
700	1	a Rudek, Benediktu Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Max Planck Inst Kernphys, Saupfercheckweg 1, D-69117 Heidelberg, Germany.4 aut
700	1	a Erk, Benjaminu Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Max Planck Inst Kernphys, Saupfercheckweg 1, D-69117 Heidelberg, Germany.4 aut
700	1	a Kassemeyer, Stephanu Max Planck Inst Med Res, Jahnstr 29, D-69120 Heidelberg, Germany.4 aut
700	1	a Schlichting, Ilmeu Max Planck Inst Med Res, Jahnstr 29, D-69120 Heidelberg, Germany.;Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Strueder, Lotharu PNSensor GmbH, Otto Hahn Ring 6, D-81739 Munich, Germany.;Univ Siegen, Emmy Noether Campus,Walter Flex Str 3, D-57068 Siegen, Germany.4 aut
700	1	a Ullrich, Joachimu Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Max Planck Inst Kernphys, Saupfercheckweg 1, D-69117 Heidelberg, Germany.;Phys Tech Bundesanstalt, Bundesallee 100, D-38116 Braunschweig, Germany.4 aut
700	1	a Schmidt, Carlou Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Max Planck Inst Kernphys, Saupfercheckweg 1, D-69117 Heidelberg, Germany.4 aut
700	1	a Krasniqi, Fatonu Max Planck Inst Med Res, Jahnstr 29, D-69120 Heidelberg, Germany.;Max Planck Adv Study Grp, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Hauser, Guenteru Max Planck Inst Halbleiterlabor, Otto Hahn Ring 6, D-81739 Munich, Germany.;Max Planck Inst Extraterr Phys, Giessenbachstr, D-85741 Garching, Germany.4 aut
700	1	a Reich, Christianu PNSensor GmbH, Otto Hahn Ring 6, D-81739 Munich, Germany.4 aut
700	1	a Soltau, Heikeu PNSensor GmbH, Otto Hahn Ring 6, D-81739 Munich, Germany.4 aut
700	1	a Schorb, Sebastianu Tech Univ Berlin, Inst Opt & Atomare Phys, Hardenbergstr 36, D-10623 Berlin, Germany.4 aut
700	1	a Hirsemann, Helmutu DESY, Photon Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Wunderer, Corneliau DESY, Photon Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Graafsma, Heinzu DESY, Photon Sci, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Chapman, Henryu DESY, Ctr Free Electron Laser Sci, Notkestr 85, D-22607 Hamburg, Germany.;Univ Hamburg, Notkestr 85, D-22607 Hamburg, Germany.4 aut
700	1	a Hajdu, Janosu Uppsala universitet,Molekylär biofysik,European XFEL, Albert Einstein Ring 19, D-22761 Hamburg, Germany.4 aut0 (Swepub:uu)janohajd
710	2	a Uppsala universitetb Molekylär biofysik4 org
773	0	t Scientific Datad : Springer Science and Business Media LLCg 3q 3x 2052-4463
856	4	u https://uu.diva-portal.org/smash/get/diva2:1072195/FULLTEXT01.pdfx primaryx Raw objecty fulltext:print
856	4	u https://www.nature.com/articles/sdata201660.pdf
856	4 8	u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-314814
856	4 8	u https://doi.org/10.1038/sdata.2016.60

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Av författaren/redakt...: Ekeberg, Tomas; Svenda, Martin; Seibert, M. Marv ...; Abergel, Chantal; Maia, Filipe R.N ...; Seltzer, Virgini ...; visa fler...; DePonte, Daniel ...; Aquila, Andrew; Andreasson, Jako ...; Iwan, Bianca; Jönsson, H. Olof; Westphal, Daniel; Odic, Dusko; Andersson, Inger; Barty, Anton; Liang, Meng; Martin, Andrew V ...; Gumprecht, Lars; Fleckenstein, Ho ...; Bajt, Sasa; Barthelmess, Mir ...; Coppola, Nicola; Claverie, Jean-M ...; Loh, N. Duane; Bostedt, Christo ...; Bozek, John D.; Krzywinski, Jace ...; Messerschmidt, M ...; Bogan, Michael J ...; Hampton, Christi ...; Sierra, Raymond ...; Frank, Matthias; Shoeman, Robert ...; Lomb, Lukas; Foucar, Lutz; Epp, Sascha W.; Rolles, Daniel; Rudenko, Artem; Hartmann, Robert; Hartmann, Andrea ...; Kimmel, Nils; Holl, Peter; Weidenspointner, ...; Rudek, Benedikt; Erk, Benjamin; Kassemeyer, Step ...; Schlichting, Ilm ...; Strueder, Lothar; Ullrich, Joachim; Schmidt, Carlo; Krasniqi, Faton; Hauser, Guenter; Reich, Christian; Soltau, Heike; Schorb, Sebastia ...; Hirsemann, Helmu ...; Wunderer, Cornel ...; Graafsma, Heinz; Chapman, Henry; Hajdu, Janos; visa färre...

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