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Modular markup for simulating vascular tumour growth
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- Johnson, David (författare)
- Department of Computer Science, University of Oxford, UK
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- Connor, Anthony J. (författare)
- Department of Computer Science, University of Oxford, UK
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- McKeever, Steve, 1969- (författare)
- Department of Computer Science, University of Oxford, UK
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(creator_code:org_t)
- IEEE, 2012
- 2012
- Engelska.
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Abstract
Ämnesord
Stäng
- In this paper we present preliminary results of the first application of TumorML being developed outside of the context of the Transatlantic TUmor Model Repositories project (TUMOR). Based on a domain-specific software framework for developing models to simulate vascular tumour growth, we have developed a corresponding domain-specific language (DSL) for use with the framework. The DSL script is directly embedded into TumorML model descriptions serving as an example of how within a single model description document, we can fully describe cancer models as functional components. We introduce the framework that our DSL orchestrates; show fragments of DSL script we have developed to describe tumour-induced angiogenesis; and how these functional model descriptions can be integrated and executed with TumorML markup.
Ämnesord
- NATURVETENSKAP -- Data- och informationsvetenskap -- Programvaruteknik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Software Engineering (hsv//eng)
- NATURVETENSKAP -- Data- och informationsvetenskap -- Bioinformatik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Bioinformatics (hsv//eng)
Nyckelord
- Bioinformatics
- Bioinformatik
Publikations- och innehållstyp
- ref (ämneskategori)
- kon (ämneskategori)