Search: WFRF:(Müller Nurasyid Martina) >
Leveraging cross-sp...
Leveraging cross-species transcription factor binding site patterns: from diabetes risk Loci to disease mechanisms.
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Claussnitzer, Melina (author)
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Dankel, Simon N (author)
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Klocke, Bernward (author)
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show more...
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Grallert, Harald (author)
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Glunk, Viktoria (author)
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Berulava, Tea (author)
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Lee, Heekyoung (author)
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- Oskolkov, Nikolay (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Genomics, Diabetes and Endocrinology,Lund University Research Groups
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- Fadista, Joao (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Genomics, Diabetes and Endocrinology,Lund University Research Groups
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Ehlers, Kerstin (author)
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Wahl, Simone (author)
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Hoffmann, Christoph (author)
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Qian, Kun (author)
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- Rönn, Tina (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Diabetes - epigenetik,Genomics, Diabetes and Endocrinology,Lund University Research Groups,Diabetes - Epigenetics
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Riess, Helene (author)
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Müller-Nurasyid, Martina (author)
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Bretschneider, Nancy (author)
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Schroeder, Timm (author)
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Skurk, Thomas (author)
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Horsthemke, Bernhard (author)
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Spieler, Derek (author)
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Klingenspor, Martin (author)
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Seifert, Martin (author)
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Kern, Michael J (author)
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- Mejhert, Niklas (author)
- Karolinska Institutet
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- Dahlman, Ingrid (author)
- Karolinska Institutet
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- Hansson, Ola (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Genomics, Diabetes and Endocrinology,Lund University Research Groups
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Hauck, Stefanie M (author)
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Blüher, Matthias (author)
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- Arner, Peter (author)
- Karolinska Institutet
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- Groop, Leif (author)
- Lund University,Lunds universitet,Genomik, diabetes och endokrinologi,Forskargrupper vid Lunds universitet,Genomics, Diabetes and Endocrinology,Lund University Research Groups
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Illig, Thomas (author)
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Suhre, Karsten (author)
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Hsu, Yi-Hsiang (author)
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Mellgren, Gunnar (author)
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Hauner, Hans (author)
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Laumen, Helmut (author)
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(creator_code:org_t)
- Elsevier BV, 2014
- 2014
- English.
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In: Cell. - : Elsevier BV. - 1097-4172 .- 0092-8674. ; 156:1-2, s. 343-358
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http://www.ncbi.nlm....
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Abstract
Subject headings
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- Genome-wide association studies have revealed numerous risk loci associated with diverse diseases. However, identification of disease-causing variants within association loci remains a major challenge. Divergence in gene expression due to cis-regulatory variants in noncoding regions is central to disease susceptibility. We show that integrative computational analysis of phylogenetic conservation with a complexity assessment of co-occurring transcription factor binding sites (TFBS) can identify cis-regulatory variants and elucidate their mechanistic role in disease. Analysis of established type 2 diabetes risk loci revealed a striking clustering of distinct homeobox TFBS. We identified the PRRX1 homeobox factor as a repressor of PPARG2 expression in adipose cells and demonstrate its adverse effect on lipid metabolism and systemic insulin sensitivity, dependent on the rs4684847 risk allele that triggers PRRX1 binding. Thus, cross-species conservation analysis at the level of co-occurring TFBS provides a valuable contribution to the translation of genetic association signals to disease-related molecular mechanisms.
Subject headings
- MEDICIN OCH HÄLSOVETENSKAP -- Klinisk medicin -- Endokrinologi och diabetes (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Clinical Medicine -- Endocrinology and Diabetes (hsv//eng)
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- art (subject category)
- ref (subject category)
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Cell
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To the university's database
- By the author/editor
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Claussnitzer, Me ...
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Dankel, Simon N
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Klocke, Bernward
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Grallert, Harald
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Glunk, Viktoria
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Berulava, Tea
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show more...
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Lee, Heekyoung
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Oskolkov, Nikola ...
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Fadista, Joao
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Ehlers, Kerstin
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Wahl, Simone
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Hoffmann, Christ ...
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Qian, Kun
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Rönn, Tina
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Riess, Helene
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Müller-Nurasyid, ...
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Bretschneider, N ...
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Schroeder, Timm
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Skurk, Thomas
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Horsthemke, Bern ...
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Spieler, Derek
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Klingenspor, Mar ...
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Seifert, Martin
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Kern, Michael J
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Mejhert, Niklas
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Dahlman, Ingrid
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Hansson, Ola
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Hauck, Stefanie ...
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Blüher, Matthias
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Arner, Peter
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Groop, Leif
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Illig, Thomas
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Suhre, Karsten
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Hsu, Yi-Hsiang
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Mellgren, Gunnar
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Hauner, Hans
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Laumen, Helmut
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show less...
- About the subject
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Clinical Medicin ...
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and Endocrinology an ...
- Articles in the publication
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Cell
- By the university
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Lund University
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Karolinska Institutet